Gene Dbac_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1214 
Symbol 
ID8376878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1341909 
End bp1342691 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID645000446 
ProductABC transporter related 
Protein accessionYP_003157733 
Protein GI256829005 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCCA TTTTACAGCT GGAAGGCGTT TCGCGGTCTT TCGGGGGGCT CATGGCTGTC 
GGTGATGTCG GCTTTGCAGT CCAGGCCGGT GAAATCTTCG GCCTGATCGG TCCCAACGGC
GCGGGCAAGA CCACGCTCTT CAACCTGATC TCCGGCATCA CTCCTGTTTC CGCCGGCAAA
ATCAGTTTTC TGGGGCAAGA CATTCTCGGC ATCGCGCCCC ACAAGGTCGC CGGGATGGGC
ATGGCCCGGA CGTTCCAGAA CATCCGCCTG TTCAGCGGCA TGAGCGTGCT CGACAATGTG
CGCGCGCCCA TGCAGGCCTT TGCCGAAACC GGCCTTTTGT CGGACCTGCT CGGCCTCCCG
GCCAGCCGCG CCCAGGAAAT GAAGATCCGG GACAAGGCGC TGGAACTGCT CGGCCTTGTC
GGGCTTGAAT CCAAGGCCCT GGATGTCGCC TCTTCCCTGC CCTACGGCGA GCGCAGGCGG
CTTGAGATCG CCCGCGCCCT GGCTCTGCGG CCCAAATTGC TGCTTCTGGA CGAACCGGCC
GCAGGCCTCA ATCTGGCCGA AAAAGCCGAA CTCAGCTCCT TCATTCGCGA CCTGCGCGAT
CGCTTCGACC TGACCGTGCT CATCATCGAG CATCATGTGC CCCTGGTCAT GGGGCTGTGT
GACCGTCTGG CCGTGCTCAA TTTCGGCCGC CTCATCTGCC AGGGCAAACC GGAGGACGTG
CGCAACGATC AATGCGTCAT CGACGCCTAT CTGGGGGACA GCCATGCCGC TGCTCGAACT
TGA
 
Protein sequence
MDAILQLEGV SRSFGGLMAV GDVGFAVQAG EIFGLIGPNG AGKTTLFNLI SGITPVSAGK 
ISFLGQDILG IAPHKVAGMG MARTFQNIRL FSGMSVLDNV RAPMQAFAET GLLSDLLGLP
ASRAQEMKIR DKALELLGLV GLESKALDVA SSLPYGERRR LEIARALALR PKLLLLDEPA
AGLNLAEKAE LSSFIRDLRD RFDLTVLIIE HHVPLVMGLC DRLAVLNFGR LICQGKPEDV
RNDQCVIDAY LGDSHAAART