Gene Dbac_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1186 
Symbol 
ID8376850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1302286 
End bp1304559 
Gene Length2274 bp 
Protein Length757 aa 
Translation table11 
GC content63% 
IMG OID645000419 
Producthypothetical protein 
Protein accessionYP_003157706 
Protein GI256828978 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3387] Glucoamylase and related glycosyl hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT CGAAATGGAC CTTTTGGCAA TACCTCATCA CGCGCGCCGC TCGCCGCCAG 
GGATTCCTGG ATCCGATCGA ACTGCTCGCG CGATTGCGCA GTTTCGCGCA GCCCTCCGAA
GTGGGCGAGC CGGTCGAGCT CTTGCGTGCC GGCGTCGTGT TCCATGCGCG CGGCCTGATC
AACAGCCGCG TGATCCAGTA CAACCTGGAC TGGGTGTGGC CTTACTGGGT CGAGCGCCAG
TTCAATCCGA AAGACGAATC ATTCATTCCA CGCGCATTTT CGGTTTCGCA TATCAATCTT
ACCCATCGCA ACTGGACCGC GCTCGGTTAT CCCGACTGTG AGGAATTTCC GCTGGTCGAT
CCGTGCGGCC TCCTGACGCC TTGCCTGGAT GGCTGGTCGC TCGATGGCTG GGTCTGTACG
GAAGAGGGGG GCAACCTGTT TCCATCGCGA ACCCTGGACG CCACCCAGCG GCAGGACCTG
TCCAGCGGCC TGACGATCAC GACACGGGTC CGGCAGGGGG GGCTGCTGCT TATCAGTACG
GCGAGCGTCG AACTCGAGGA CGGCAGGCCG GTGTGCGTGC TGACGCTGAT GGGCCGGGCC
GACACGCCGG CCTGGCTGGT GCTCGCCTTG CGCCCGGCCA ATACGGAAGG GATCAGCTTC
ATCAATGATG TGGTTCTTTC CCCCGATCGC CAGGCCTGGG TCGTGAACGA CGAACAGAGC
GTCGCGTTCA GTGCTCCGGC GGAGCGCCAT CTGGTCTCCG ACTATGGCAA TGGCGATGTC
GCGCTCCATT TGAAGCAGGC CTATGCCGGC GCGGAACTCG ATGAGCGAGG CGAGGGCAGC
TGCGACCGCG GCATGGTTAC GGCGGCCGCG CTGTTCGCGA TACCCGAAGG CGGCGAAAGG
GTTGTGACTG CCCGTATTCC ACTCTCGCAC ACGTCAACGG CATCCGTACT GGCGGAGAAT
GCCTGGCCGG ACCTGCGTGC AAGCGCGTGC ACGCTGCAGT GCCCTGATCG CACGTATCAG
GAGCTCTATG ACGCGGCGAT CACGTCGCTC ATTCTGCATT CACCGGGCGA TGTGTATCCG
GGTCCATCGA CCTACAGGCG TTTCTGGTTT CGCGATGCCG TCTACATCAT TCATGCCCTG
CTCTGTGTAG GTCTGGAAAC GCGTGCAACA CGCGCGCTGA GCCGCTTTCC CGAGCGGCAA
ACCCCACTCG GCTATTTTCG TTCGCAGGAA GGCGAGTGGG ATTCCAACGG CGAGGTCCTG
TGGATCCTGC ACCGCTATCA GCAACTCACG GGCAAGAAAC TGACCGCCGA CTGGCACAAC
GTGATCGCAC GCGGCGCGCG CTGGATCATG CGCAAGCGGC TTTCCGGCAC GCTCGATGCG
CCACATGCGG GCCTGCTGCC GGCCGGTTTC AGTGCCGAGC ACCTCGGTCC GAACGATTAT
TACTACTGGG ACGACTTCTG GGGCATCGCC GGGCTGCAGT GCGCCGGTGA ATTGGTCCGC
AGCCAGGATG CAGGCATGGC CGCCGAGTTC GCGCACGCCG CCGACGATTT CGCCGCGGCG
GTGGACCGCA GCCTGGCTTC CTGCGCGCAG CGGCTGGGAC GGCCGGGCAT GCCGGCTTCG
CCGTACCGGC GACTTGATTC CGGCGCCATC GGTTCGATCG TGTCCGGCTA CCCCTTGCAG
CTCCATGCGG CGGATGATCC ACGACTGCTC GACTGCGCCG ATTATCTGCT GAACGCCTGT
TTCATCGATG GCGCTTTTTT TCAGGACATG ATCCATTCCG GTCTGAACGC CTATCTGACC
TTGCATGTGG CGCAGGTGTT GCTGCGCGCG GGCGACCCCC GGTACCAAGA TCTGATGGAC
TCGGTGGCGG ACCTGGCGAC GTCGACGGGC CAATGGCCTG AAGCGATTCA TCCGCAGACA
CGGGGTGGGT GCATGGGCGA TGGCCATCAT GTCTGGGCAG CGGCCGAATG GGTCCTCATG
GTGCGCAATT GCTTTGTGCG CGAAGAGGGC GACCGTCTGA TCCTGTGCTC GGGTATTGGC
AAACGCTGGC TGCAGGAGGG CGGTCCCGTC GTGTTCGGCC CGGCTCCCAC CTGCTTCGGA
CCGGTGTCCA TTACCCTGCG TCCGCTCTCG GATGGCAGCG TCGAAATCGT CCTTAAGACG
GCGTGGCACG CCCAGGAACC GGCCATCGAT GTGCGCCTTC CCGGCCATAA GCCTGTCACG
CTGGAACGCA ATGCCGCCAA CGTCATCCTG ACAAGAGAGG AATCCTCTGC ATGA
 
Protein sequence
MKFSKWTFWQ YLITRAARRQ GFLDPIELLA RLRSFAQPSE VGEPVELLRA GVVFHARGLI 
NSRVIQYNLD WVWPYWVERQ FNPKDESFIP RAFSVSHINL THRNWTALGY PDCEEFPLVD
PCGLLTPCLD GWSLDGWVCT EEGGNLFPSR TLDATQRQDL SSGLTITTRV RQGGLLLIST
ASVELEDGRP VCVLTLMGRA DTPAWLVLAL RPANTEGISF INDVVLSPDR QAWVVNDEQS
VAFSAPAERH LVSDYGNGDV ALHLKQAYAG AELDERGEGS CDRGMVTAAA LFAIPEGGER
VVTARIPLSH TSTASVLAEN AWPDLRASAC TLQCPDRTYQ ELYDAAITSL ILHSPGDVYP
GPSTYRRFWF RDAVYIIHAL LCVGLETRAT RALSRFPERQ TPLGYFRSQE GEWDSNGEVL
WILHRYQQLT GKKLTADWHN VIARGARWIM RKRLSGTLDA PHAGLLPAGF SAEHLGPNDY
YYWDDFWGIA GLQCAGELVR SQDAGMAAEF AHAADDFAAA VDRSLASCAQ RLGRPGMPAS
PYRRLDSGAI GSIVSGYPLQ LHAADDPRLL DCADYLLNAC FIDGAFFQDM IHSGLNAYLT
LHVAQVLLRA GDPRYQDLMD SVADLATSTG QWPEAIHPQT RGGCMGDGHH VWAAAEWVLM
VRNCFVREEG DRLILCSGIG KRWLQEGGPV VFGPAPTCFG PVSITLRPLS DGSVEIVLKT
AWHAQEPAID VRLPGHKPVT LERNAANVIL TREESSA