Gene Dbac_1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1184 
Symbol 
ID8376848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1299687 
End bp1301231 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content56% 
IMG OID645000417 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003157704 
Protein GI256828976 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGTA ATTCCGGACA AACCAGATCG ATCTGGATGG CAATAGAAGA AGAGCTTGAA 
TCAGCCCCGC TTGGCGAGAA TATGCATGCG GACGTGTGTA TTGTCGGCGC CGGGATCGCG
GGCATGACAA CCGCATATCT CCTGACGCGC GCGGGCAAGG CAGTGATTGT CCTGGATGAC
GGACACATTG GGGGAGGGAT GACGGAGCGC ACGACGGCGC ATCTGTGCAC TGCGATTGAC
GACCGCTATT TCAAGATCGA GCATCTCCAC GGCGAAAAGG GGGCGATGCT CGCGGCCCAG
AGTCACACGG CGGCCATTGA TCGCATTGAG GCCATTGTAG GTGAAGAAGG AATTGCCTGT
GAATTCGAGC GCCTTGACGG CTACCTCTTT GTCCCGCCGA ATGACTCTCA GGATGTGCTC
GAACGTGAGG TCAAAGCAGC CCATCGCGCC GGACTCACGG ATGTTGAACA CGTCGAAAGG
GCGCCAATCG ATGGCTTCGA CACCGGTATG TGTTTGCGCT TTCCGCGGCA GGCCCAGTTT
CATCCCATGA AGTATTTGGC CGGACTAAAA CGCGCTATTG AACGGAACGG CGGGCGCATC
TTCACGGGAA CACATGCCGG CAAAATAGAA GGCGGCACCA ATGGGCGGGT CGAAACAGAC
AGTGGCTTCC TGGTGACTGC CGATGCGATT GTGATAGCTA CAAACACACC AGTCAACGAT
ATCGTTACCA TTCACACCAA GCAGTCTTCT TATACGACCT ACGTCATTGG CGCACGGATT
CCTCGCGGTT CCGTCGCAAG AGCGCTCTAC TGGGATACGG AAGAGCCGTA TCACTACGTC
AGAGTGCAGA GCGTTTCCGC CAGAGATGGG GACGATTACG ATCTTCTGAT CGTCGGCGGT
GAAGATCACA AATCGGGACA GGCAGACGAC GGTGACCAGC GCTACGCAAA TCTTGAAGCG
TGGGCACGGG AACGATTCCC GATGATCGCG AGTACAGAGA TGCGTTGGTC TGGTCAGGTT
CTGGAGCCTG TCGACGGCCT CGCTTTCATC GGGCGCAACC CCGGAGACCA ACAAAACGTC
TATATCATCA CGGGGGATTC GGGGATGGGG ATGACGCATG GCACCATTGG CGGAATTCTT
ATCACGGAAT TAATTGTTGG ACGTTCGTGT CCTTGGGAGC CGCTTTACGA TCCTTCACGA
ATAACCCTCC GAGCATCTCT CCAATATGCC CGGGAGAACA TCAATGTCGC CGTGGAGTAT
TTTGAGGGTT ATTTGAGCGG TGGTGACGTC GACTCGCCCG AAGACATTGC ACCAGGCGAA
GGTGCTATCG TTCGTCGCGG GCTTTCGAAG GTCGCTGTTT ACCGTGATGA AGATGGAATC
GTGCATGAAC GTTCAGCCGT GTGCCCACAC CTCGGGGGGA TCATCGGTTG GAATAAATCG
GAGAAGACCT GGGATTGTCC GTGTCACGGT TCAAGATTCG ACTGCTATGG CCGGGTCATT
ACCGGACCAG CGAACAGTGA CCTTGAGAGC GTGAAAGAAG ACTAG
 
Protein sequence
MDSNSGQTRS IWMAIEEELE SAPLGENMHA DVCIVGAGIA GMTTAYLLTR AGKAVIVLDD 
GHIGGGMTER TTAHLCTAID DRYFKIEHLH GEKGAMLAAQ SHTAAIDRIE AIVGEEGIAC
EFERLDGYLF VPPNDSQDVL EREVKAAHRA GLTDVEHVER APIDGFDTGM CLRFPRQAQF
HPMKYLAGLK RAIERNGGRI FTGTHAGKIE GGTNGRVETD SGFLVTADAI VIATNTPVND
IVTIHTKQSS YTTYVIGARI PRGSVARALY WDTEEPYHYV RVQSVSARDG DDYDLLIVGG
EDHKSGQADD GDQRYANLEA WARERFPMIA STEMRWSGQV LEPVDGLAFI GRNPGDQQNV
YIITGDSGMG MTHGTIGGIL ITELIVGRSC PWEPLYDPSR ITLRASLQYA RENINVAVEY
FEGYLSGGDV DSPEDIAPGE GAIVRRGLSK VAVYRDEDGI VHERSAVCPH LGGIIGWNKS
EKTWDCPCHG SRFDCYGRVI TGPANSDLES VKED