Gene Dbac_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1178 
Symbol 
ID8376842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1294115 
End bp1295392 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content55% 
IMG OID645000411 
Productphospholipase D/Transphosphatidylase 
Protein accessionYP_003157698 
Protein GI256828970 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.317837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCAT TCCGATCGAT TCGCTTGTGG CATTCGTGCA TATATCTGCT CGTTTTGATT 
ACAGCGGGAT GCGGCATGTC GTACCGTGAA AAGGTTGTTG AACACCCGAT TCCTCGTCTT
TACGGGACGG AAGACCCGCA ATTTTCCCGT ACGATGGGGA CATTGCTCGG CTCGGACATC
CTCGATGGCA ATCTAGTTGA GGTGCTGTTG AACGGTGACG AGATCTTTCC CGCCATGCTG
CAAGCAATCC GTAGCGCCGA AAAAACCATC ACCTTCGAAA CCTTCAACTA TTGGTCCGGC
TCGATCGGCA GCGATTTTTC GAACGCCTTG GCCGAACGTG CTCGCGCAGG CGTCAAGGTT
CATGTCCTGC TGGATTGGAT CGGCAGTTAC AAGATGGACG CATCTCAGCT CGAATTGATG
GAGCAGGCCG GTGTCGAGGT GAAGAAATTT AATAAACCGC ACTGGTATCA GTTAGGCCGA
TTGAACAATC GCACACACCG CAAGCTGCTG GTTGTCGACG GACAGATCGG TTTTACGGGC
GGTGTTGGAA TCGGAGATCA ATGGTCTGGG CATGCGCAAG ACCCTGAACA TTGGCGCGAT
TCGCACTATC GGTTCCAAGG CCCCGTGGTG GGGCAGATGC AAGCTGTCTT TATGGACAAC
TGGATCAAAG TCAGCGGTGA TGTACTGCAT GGCCCCGCGT ACTTCCCTGC GTTGCAGCCC
GTCGGCTCCG GCAAGGCGCA CGTGTTCAGC AGCTCTCCGT CAGGGGGAAG CGAAAGCATG
CGCCTCATGT ACCTGCTTGC AATCACCGCC GCGAGCCGCA CCATTCACCT TTCCACTCCG
TACTTCATTC CCGACGCATT GACGATCCAA ACACTCACCG ATGCCGCAAA GCGCGGCGTG
ACCGTCCAGA TCATAACAGT CGGCGACCAC GCAGACAGTG AGACGGTAAG GCGTGCATCC
CGGGCACGCT GGGGCGACTT ACTCGAAGCG GGGATTGAAA TACATGAATA TCAGCCGACC
CTGTACCACT GCAAGGTGAT GATCGTCGAT GGGCTGTGGA CATCGGTGGG CTCGACGAAT
TTTGACCCCC GTTCCTTCAG CCTGAATCAC GAGGCGAATG TGAACTATTA CGACCGCGAT
TTTGCCCTGC GTCTGATCGA AATTTTTCAA GAAGACCTGG CCCGTTCGCG ACAGGTAACA
TTCCAGGAGT GGAAGGACCG GCCGCTTGTC GAAAAAATCT GGGAACATGC AGCATCGCTT
CTCGGTTCGC AGTTGTGA
 
Protein sequence
MAAFRSIRLW HSCIYLLVLI TAGCGMSYRE KVVEHPIPRL YGTEDPQFSR TMGTLLGSDI 
LDGNLVEVLL NGDEIFPAML QAIRSAEKTI TFETFNYWSG SIGSDFSNAL AERARAGVKV
HVLLDWIGSY KMDASQLELM EQAGVEVKKF NKPHWYQLGR LNNRTHRKLL VVDGQIGFTG
GVGIGDQWSG HAQDPEHWRD SHYRFQGPVV GQMQAVFMDN WIKVSGDVLH GPAYFPALQP
VGSGKAHVFS SSPSGGSESM RLMYLLAITA ASRTIHLSTP YFIPDALTIQ TLTDAAKRGV
TVQIITVGDH ADSETVRRAS RARWGDLLEA GIEIHEYQPT LYHCKVMIVD GLWTSVGSTN
FDPRSFSLNH EANVNYYDRD FALRLIEIFQ EDLARSRQVT FQEWKDRPLV EKIWEHAASL
LGSQL