Gene Dbac_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1153 
Symbol 
ID8376817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1262227 
End bp1265658 
Gene Length3432 bp 
Protein Length1143 aa 
Translation table11 
GC content60% 
IMG OID645000386 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_003157673 
Protein GI256828945 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.648529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCATA ATGGCGTCGG CGGGAGATTG AGACTGTATC GTCAGCTGCG TGACATGACG 
CAGGAGAGTC TTTCCGAAGT CATCGGCGTT ACGAAGCAGC ACTTGGGCCA GATCGAACGC
GGGCAGTGCA ATCCGTCGCT TGATTTTCTG TCCAAGGCCG CAGCAGCCTT GAACACCCAG
GTCGCCAATT TTTTCCTCGG CAACAGCCAC GATCCAACTG TTTCCGGCTG CTCCACTTGT
TCCGAAGACG CCGGGCGCAT CCAGCCCTTT GCCGGGTGCG GCCTGTGGAC AGTCTCGGGC
CACGTCGGCA AAAACCTCTG GTCCAGATCC CTGTGCAGGA TGCTCGGCTA TGCGTCCGTA
CGTGTTCCAT CCCTCGCCAA ATTCTCCAGA CACCTCGCCG CAAACGATGC CGGAACATTC
CAGTCCTTTT TCGGGCAGGT GATCGAAGGC AGAACTCCGG ACCCCGTCAT CATCGACCTG
ACCCGCAGGG ACGGAGTGCT CAGAAAGGTG CAGGCCCAGG CGGAAATCCT GAGCGCCGGC
GACGGACTCA CGGACATCAG GTGCATCATC TTCTGGGATA TGACGGACTG GCTTGAAACC
CATCGTCTTT TCCACCACAC GCAGCAGGAA CTGGGCGAAA CCATCGATGA CAGAACAGCG
GCCCTGACCG CCGCGGTCTC GGATGCCAAG CGGGAACTGG AACTGCGTCA GGATACGGAA
CGCGCATTGC AGCAGGCCCA CAATAATCTG AGCAGGCTGA TCCAAACCAT CCCGGTCATC
GTCTATTCCC GGAGCCTCGA CGGCTCCACG GCCCATTACT GCTCACCACA GGCTCTTGAT
GTCCTCGGAT ACAGCCCGGG GGAAACGGAC AAGGCAAAAG GTTTTTGGAC CGACCGTATC
CACCCCGAAG ATGCTCCCGT GTACACGGAG GCGATGAAAC TGGCCTCACG CACGGGTTTC
CTCGATGTCG AGTATCGCGT GCTGAGCGAG ACCGGAAAAG AGACATGGCT TCACGACAAG
GCGGTCATGA CGGACAAGGG GGCGGGTCTT GTCATGCACG GGGTGGCCAC GGACATCACG
GAGCAAAAAC GGGAGATCGA GACCAGAAAA GCCCTAGAGC GAAAGAGTCG GCAACTGGAC
ACCATGCTGC GGCTGATCTG CGACAACGTA CCGGACATGA TCTGGGCCAA GGATATGCAA
AAAAAGTATA TTTTCGCCAA CAAAGCTGTC TGCGAAACGT TGCTTATCGC CCGCGACACT
GACGAACCCA TTGGCAGGAC GGACCTCTTC TTCGCGCAGC GGGAACGTGC CAGGCATCCG
GATAATCCGG ATTGGCACAG CTTCGGCGAG ATCTGCCGCG ACACCGACCA GATCACCATC
GACGCAGGAT GCCCGCAGCA GTTTGATGAA TACGGCAACG TCGGCGGAAA ATTCCTGTTT
CTCGACGTGC GCAAGGCCCC GCTCTTCGAT GAAAGCGGAG TCAACATCGG AACCGTCGGG
TCGGCCAGGG ACGTGACCGG GCAGAGGCGG ATGGAGAAGA AACTGGAGGC GGGCAACGTC
GCCCTGCGCG CCATCCTCGA CAGCATCCCG GCCGACATCT GCGTGGTGGA CGTGGCCACG
GACGAGATCC TTTTCATGAA CGCGTCCATG CGGGAAAATT CAGTGGAGAG CGGAACGGGC
TTTCATCACC CCCGGCAGCA ATCCGACGGC GGTGAACCTC TTTGCCCCGG CAAAGCCCTA
CAGGGCAATG AAATGGCTTC GTGGGAAGCC CTCGACCACT CCACCGGAAA ATGGAACCTG
CATTTCGACA GGCCTGTGTC CTGGCTCGAC GGGCGTCCGG CCCGCATCCG CATCGCCATG
GACATCACAG CGCGCAAGCA CGCTGAGCGT CTCATGGAGA AAGCCGTCGA CGAGCAGCGC
ATCCTGCTCG ACTATATCCA GACGCAGATC TGGTACCTCA TCGACGAACA AACCTACGGG
GCCGTGAACG AGGCGCACGC CGCCTTCAAC GGCCTCGGCA TTGGGGACAT GGCCTACCGG
GACATCTACG AAATCTACCC GGTCGATGTG GCTGACGTCT GCCGCCAGGG GAACGAGGTT
GTCTTTTCTT CGGGTCGCCC GGTGCGCACC GAGGAGTGGC TACCGCATTT CTCGGGTGAG
AAAAGGTTCC TCTCCATCCT CAAATCTCCC AAACTCCGTG CTGACGGAAC GGTCGAGTAC
GTGGTCTGTT CGGGGGAGGA CATCACCGAG CGCTGGAAGT CCGAAGAGGC TCTCAAGAAA
GCCAAGGAAC AGGCCGAGGA GGCCAGCAGG GTCAAGTCCG GCTTCCTGGC CAGCATGAGC
CACGAGATCC GTACGCCCAT CAACGGAATA ATGGGCATGC TCCAGTTGCT GCAGACCGCG
GATCTTAATG CGGATCAGGC CTCGTTCGTG GACATGGCTG TGCGATCCTG CGACCGGTTG
GTGCGCCTGC TCTCCGACAT CATGGATTTT TCGCGCATCG AGGCCGGCAA GCTCACCATC
CAGTCCGCGC CGATGAGCCT GGAAAGCGTT TTCAGCCACG TCCGGGAACT GTTCACGCCT
CTCAGCGGGA GCAACGGGGT CGTTCTCGAC TTCACTCTGG ACCCGGCCTT GCCCGACCGC
ATCCTCGGCG ACGCATTTCG CTTGCAGCAG ATCCTCAACA ACCTGGTGGA CAACGCCTGC
AAGTTCACCA CTTCCGGCCG CATAACCGTG CAGGCCTGGA ACCTGACTGC TGTTGAACCG
CGAACCGTGC GGGTTTTTTT CGAGGTTTCG GATACGGGCA TCGGCATCCC CGACGAGGAT
TTGCGGCGTC TTTTCGACCC GTTCATACAG CTCTGTGATG GATATGTCCG CAGTCACAAG
GGCGTTGGGC TCGGCCTCTC CATTTGCAAG CGTCTGGTGG AGCTCATGGG TGGCGGCATG
TCCGTGACCA GCGAGGCGGG AAAGGGCACG ACTTTCGCCT TTTCGCTGCG CTTTGAGACG
GATTGTCCCC CTGCTCGCCC CGGCGGCTCC GATGAACGAA AAACCGCCAA TCTTGCGGAC
AGGCGCGTTC TGCTGGTGGA GGACGACCAG GTCAGCGCCG TGGCCGGAGT GGCCCTGCTG
GGCCGCCACG GAGCCGCAGT GGTCCACGTC CGCAGCGGCC AGGAGGCCCT GGACGCCCTG
CGCAGGCAAC CCTTCGATCT TGTGGTCATG GATGTGCAGA TGCAGGACAT GGACGGCATC
GAGGCCACCA TGCGCATCCG CGAGGGCGAA GCCGGAGAGA CGGTCAGGAA TATCCCCGTC
ATCGCGTTGA CGGCCTGCGC CATGGCCGGC GACAGGGAAC GCTTTTTGGC AGCCGGCATG
AACAGCTATG TAGCCAAGCC CATGGACATC CGCGAGATGC TCCGCGTCGC GGGACAGGCC
ATGCGGAACT GA
 
Protein sequence
MVHNGVGGRL RLYRQLRDMT QESLSEVIGV TKQHLGQIER GQCNPSLDFL SKAAAALNTQ 
VANFFLGNSH DPTVSGCSTC SEDAGRIQPF AGCGLWTVSG HVGKNLWSRS LCRMLGYASV
RVPSLAKFSR HLAANDAGTF QSFFGQVIEG RTPDPVIIDL TRRDGVLRKV QAQAEILSAG
DGLTDIRCII FWDMTDWLET HRLFHHTQQE LGETIDDRTA ALTAAVSDAK RELELRQDTE
RALQQAHNNL SRLIQTIPVI VYSRSLDGST AHYCSPQALD VLGYSPGETD KAKGFWTDRI
HPEDAPVYTE AMKLASRTGF LDVEYRVLSE TGKETWLHDK AVMTDKGAGL VMHGVATDIT
EQKREIETRK ALERKSRQLD TMLRLICDNV PDMIWAKDMQ KKYIFANKAV CETLLIARDT
DEPIGRTDLF FAQRERARHP DNPDWHSFGE ICRDTDQITI DAGCPQQFDE YGNVGGKFLF
LDVRKAPLFD ESGVNIGTVG SARDVTGQRR MEKKLEAGNV ALRAILDSIP ADICVVDVAT
DEILFMNASM RENSVESGTG FHHPRQQSDG GEPLCPGKAL QGNEMASWEA LDHSTGKWNL
HFDRPVSWLD GRPARIRIAM DITARKHAER LMEKAVDEQR ILLDYIQTQI WYLIDEQTYG
AVNEAHAAFN GLGIGDMAYR DIYEIYPVDV ADVCRQGNEV VFSSGRPVRT EEWLPHFSGE
KRFLSILKSP KLRADGTVEY VVCSGEDITE RWKSEEALKK AKEQAEEASR VKSGFLASMS
HEIRTPINGI MGMLQLLQTA DLNADQASFV DMAVRSCDRL VRLLSDIMDF SRIEAGKLTI
QSAPMSLESV FSHVRELFTP LSGSNGVVLD FTLDPALPDR ILGDAFRLQQ ILNNLVDNAC
KFTTSGRITV QAWNLTAVEP RTVRVFFEVS DTGIGIPDED LRRLFDPFIQ LCDGYVRSHK
GVGLGLSICK RLVELMGGGM SVTSEAGKGT TFAFSLRFET DCPPARPGGS DERKTANLAD
RRVLLVEDDQ VSAVAGVALL GRHGAAVVHV RSGQEALDAL RRQPFDLVVM DVQMQDMDGI
EATMRIREGE AGETVRNIPV IALTACAMAG DRERFLAAGM NSYVAKPMDI REMLRVAGQA
MRN