| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1142 |
|---|
| Symbol | |
|---|
| ID | 8376806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 1248835 |
|---|
| End bp | 1249983 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645000375 |
|---|
| Product | glucose sorbosone dehydrogenase |
|---|
| Protein accession | YP_003157662 |
|---|
| Protein GI | 256828934 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.320436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGAA GCATCTTCAG TCAAGGCGAA TCTTTGCTTG TGGCAGTCTT TCTCGGCGTC
CTGCTCATCC TGCCCGCCAA TGTGGCGGGA GCGGAGGAAT TTTCCTCCAG GCATCACCGT
TTTCGCGTCA CGGCCGTTGC CGCGGGCCTG GAACATCCCT GGTCCGTGGC CTTTCTTCCG
GACGGTGACA TCCTGGTCAG CGAGCGCCCG GGACGACTGC GCATCATCCG CGACGGGGCC
TTGCTGGATG CGCCGGTCAG CGGCCTGCCG CAAATCCGGG CCCGCGGGCA AGGCGGCTTG
CTCGATCTTC TGCCCCACCC GGAATTCGCG CAGAACCGCA TTCTGTTCTT CAGTTACTCG
GCAAGCCTCG GCAACGAGGT GACCACGCAT GTGGCCCGGG CACGATTTGA GGATGACACG
CTCAAAGACG TGACCGTGCT CTTTCGGGCG GAACCGGCCT CGGCGGGGCG GATCCATTTC
GGTTCCAGAC TGAGCCTTGA TCGCCAGGGG CATCTCTACA TCAGCGTCGG CGACCGCGGC
CAGATGCAAC GGGCACAGAA GCTCGACGAT CATGCCGGAA AAATTCTTCG TATCCATGAG
GATGGACGCA TTCCCGAGGA CAATCCCTTT GTCGGTCAAG AGAATGCCTG GACGGAAATC
TACAGCTATG GGCACCGAAA TCCCCAAGGC ATGGCCGTGC ATCCGCAAAC CGGAGAAATC
TGGACGCACG AGCACGGCCC CAGGGGCGGG GACGAGATCA ACATCATCCG TCCCGGCGTC
AATTACGGCT GGCCCGTAGT GACCTTGGGC ATCGATTACA CCGGCTTCAC CATCGGAGAC
GGACTGAAGC ACAAGCCCGG CATGGCAGAC CCACTGCATC ACTGGACGCC CTCCATCGCA
CCCTCGGGCA TGACCTTTTA CACGGGTGAT GCCTTTCCCG CTTGGAAGGG TGATCTTTTC
GTCGGAGCCC TTTCCCATCG CCATCTCGCA CGCTTGAAAC TGGCCGGAGA AGTCGTGATC
GAGGAAGAAC GCCTGCTTAC GGACTTGAGA CTGCGCATCC GTGACGTGCG CACCGGACCG
GACGGCAACC TGTGGCTGCT CACAGACCAC GATCCCGGCC AGTTGCTGCG TCTGGAACCT
GCGCAGTGA
|
|---|
| Protein sequence | MRRSIFSQGE SLLVAVFLGV LLILPANVAG AEEFSSRHHR FRVTAVAAGL EHPWSVAFLP
DGDILVSERP GRLRIIRDGA LLDAPVSGLP QIRARGQGGL LDLLPHPEFA QNRILFFSYS
ASLGNEVTTH VARARFEDDT LKDVTVLFRA EPASAGRIHF GSRLSLDRQG HLYISVGDRG
QMQRAQKLDD HAGKILRIHE DGRIPEDNPF VGQENAWTEI YSYGHRNPQG MAVHPQTGEI
WTHEHGPRGG DEINIIRPGV NYGWPVVTLG IDYTGFTIGD GLKHKPGMAD PLHHWTPSIA
PSGMTFYTGD AFPAWKGDLF VGALSHRHLA RLKLAGEVVI EEERLLTDLR LRIRDVRTGP
DGNLWLLTDH DPGQLLRLEP AQ
|
|---|
| |