Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1131 |
Symbol | |
ID | 8376795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1237535 |
End bp | 1238617 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 645000364 |
Product | twitching motility protein |
Protein accession | YP_003157651 |
Protein GI | 256828923 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.809253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAAA TAGATGCCTT TTTTAAAATG ATGCATGAGC TTGGGGCCTC GGATCTTCAT CTGTCATCAG GTTCGCAGCC GATTATCCGT CTGCATGGTG AAATGCAGCG CATCAAATAC AAATTTCTTG AGCATGAAGA ACTCAAGAAA ATGCTCTACG AAATAACTCC AGAAAATAAG ATCAAGACAT TCGAAGAAAG CGGTGATGTG GACTTCTCCT ACGAAGTCAC TCATTTGGCT CGGTACCGCG CCAATTTCTT TTTGCAGAAG CGTGGAATCG GGGCGGTTTT TCGAGAAATT CCGCAAAAAA TCCTTACCAT CGAGGAACTG GGCCTGCCGA GCATCCTGAA GAATCTGGCT TTATTGCCCA AGGGACTGGT ATTGGTCACC GGCCCTACGG GTAGCGGTAA ATCCACCACT CTGGCCGCCA TTGTCGATTA CGTGAACAAG ATCCGCAAGG ATCATATCCT GACCATCGAA GACCCCATCG AATTCGTACA CGAACCGCAG AGCTGCCTGA TCAACCAGCG TGAAGTCGGC CGGGACACCA TGTCTTTCAG CGCCGCCTTG CGCGGGGCGC TACGCGAGGA CCCGGACATC ATTCTGGTCG GCGAAATGCG AGACCTCGAA ACCATTCAGC TGGCTCTTGA GGCGGCCGAG ACCGGCCATC TGGTTTTTGC GACCCTGCAT ACCATCTCCG CCTCGAAAAC CATCGACCGC ATCATCGAGG TCTTTCCCGG TGATTTACAG GGTCAGATTC GCTCCGGCCT TGCCGACTCC CTGCGGGCCA TCATTGCGCA GAACCTTTTC AAGCGCATAG ACAGACCCGG GCGCGTTGCC GGCATTGAAG TCCTCATCGC CACCCCTGCC GTGCGAAACC TGATCCGCGA AAACAAGATT TTTCAGATCA ACTCCGTTAT CGAGACCGGA CGAAAGTTCG GCATGCAGAG CATCGACGAC GCCATCATGA AGCTTCTCAC CGCCGGTGTC ATCGACGCTG AGCAAGCATA CAACAAGGCT GCCACGAAGT CGAAATTCAG GGAATTTCTC ACCACTCCGC CCCAAGATTT CACCGAGGTG TAA
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Protein sequence | MAQIDAFFKM MHELGASDLH LSSGSQPIIR LHGEMQRIKY KFLEHEELKK MLYEITPENK IKTFEESGDV DFSYEVTHLA RYRANFFLQK RGIGAVFREI PQKILTIEEL GLPSILKNLA LLPKGLVLVT GPTGSGKSTT LAAIVDYVNK IRKDHILTIE DPIEFVHEPQ SCLINQREVG RDTMSFSAAL RGALREDPDI ILVGEMRDLE TIQLALEAAE TGHLVFATLH TISASKTIDR IIEVFPGDLQ GQIRSGLADS LRAIIAQNLF KRIDRPGRVA GIEVLIATPA VRNLIRENKI FQINSVIETG RKFGMQSIDD AIMKLLTAGV IDAEQAYNKA ATKSKFREFL TTPPQDFTEV
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