Gene Dbac_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1040 
Symbol 
ID8376701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1128181 
End bp1129059 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content61% 
IMG OID645000280 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_003157569 
Protein GI256828841 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.821044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA TAGGCTGGGT CGGAATCGGT GTCATGGGGC GTTCCATGTG TGGTCACCTG 
CTTGCGGCAG GTCATGAGGT CAAGGTCCAT ACGCGCACCA AGGCTTCCGG CCAAAGCACC
ATCGCCGCTG GAGCGCAGTG GTGCGACACC CCTGGCGATG TCGCTAAGGG GTCGGAATTC
GTGTTCACCA TCGTCGGTTA TCCGGCCGAT GTGAGAGCCG TGTATCTGGG TGAGGGCGGG
CTTGTGGATC AGGCCGCGCC AGGGGCGGTG CTTGTGGATA TGACCACCTC CGAGCCGGCT
CTGGCCACGG AGATTTATCA GGCGGCGCGG GCTCGTGGAG TGGCCGCTCT GGATGCTCCG
GTCTCCGGCG GCGATCTCGG TGCGCGCGGC GCAAGCCTGG CCATCATGGT CGGCGGTGAG
CAGGAGCCAT TTGACCGGAC CCTGCCCCTG TTCGAGAAGA TGGGGAAGAA CATCCGCCTC
ATGGGCGCTC CCGGTGCCGG TCAGCACACC AAGATGAGTA ACCAGATTCT CATCGCCGGG
ACCATGATCG GAGTTGTGGA ATCCCTGCTC TACGCCGTGA AGTCCGGTCT GGACGTGGAC
GACGTCATCG ACGTCATCGG CAGCGGGGCG GCCGGGTCCT GGTCCATCAA CAACCTGGGT
CGTCGGATCG CCAAGGATGA CTATGATCCG GGCTTTTTCA TCAAGCACTT CGTGAAGGAC
ATGGGTATCG CCCTGGCCGA AGCCCGCAAA ATGGGCATCG CCTTGCCCGG CCTTGCCCTG
GTCGAACAGC TTTATATCGC GGCCATGGCG CAGGGATTGG AAAACATGGG CACTCAGGCT
CTCTATATCG CGTTGAAGAA TTTAAACGCT GTAAGATAG
 
Protein sequence
MSKIGWVGIG VMGRSMCGHL LAAGHEVKVH TRTKASGQST IAAGAQWCDT PGDVAKGSEF 
VFTIVGYPAD VRAVYLGEGG LVDQAAPGAV LVDMTTSEPA LATEIYQAAR ARGVAALDAP
VSGGDLGARG ASLAIMVGGE QEPFDRTLPL FEKMGKNIRL MGAPGAGQHT KMSNQILIAG
TMIGVVESLL YAVKSGLDVD DVIDVIGSGA AGSWSINNLG RRIAKDDYDP GFFIKHFVKD
MGIALAEARK MGIALPGLAL VEQLYIAAMA QGLENMGTQA LYIALKNLNA VR