Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0975 |
Symbol | |
ID | 8376633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1056891 |
End bp | 1058942 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645000214 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003157506 |
Protein GI | 256828778 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCGT ACGCACGCAT TTCGCTCAAG AACAAGATAT TCGCCTCCAT CCTGGCCGTT ATCCTCATCA TCAGCGTGAC CATCGCGCTC CTGGCCCGCT GGATCCTCAT TTCCGGACTG ACCAAGGAGC TGGAGCTGCG CGGTATTGCA GTAGCCCACT CCATTGCCGA ACGAGGCGGC GGGTTTGTTC TCGACAAGAA CTATTCGGAG TTGCTCAGCC TCATTTTCGA AGAAGCGCGC CTGCGGGAAC GCCAGCACAT GATCAATTAC ATCTTCGTGC TCGATCGCAG CGAAAAGGTT CTCTCCCACA CCTTCACGGT GCCTTTTCCC GGCCCCTTGA GCACTGCCAA CCCGGTGCTC GAAGGAAAAA TGAACAGCGT GCGTCTGGTC GCGGTGGGAG CGCAGACCTC CTACGACATC GCCGTGTCGA TGAACGAGGG CCTGTACCGC ATTGGAACGG TGCACGTGGG CCTGAGCAAG GAGCATATCG ACAAACTCGT TTCCAAGCTC AGATTCATGT TCCTGGGGTT CATATCGGCG GTCATCATCA TCATCTTTTA TGTCAGCCAT CGCATTTCGC GCTACATAAC CAGTCCGATT TCTCGCCTGA CGAACATTTC GGATGAACTC AGCCGGGGAA ATTTCGATGT GCATCTGGAC CTTGGCGAGG ACCTTGACTG GGCGGTGACC AACTGCCCGG CCTACAAGGA CACCAACATG CCCTGCTGGC ATTTTGATGA ACAGGGGCGC AAATCCCTCA AATCCAAGGG CAAGACCGGC CAGGTCTGCG CGACCTGTCT CTTCTATCGC AAGCGGGAGG GGGACGAGGT CATCCAGCTC GCCGACTCGT TCATGAGCAT GGTCTGGTCC ATCCGTCTCT ACCGCAAGCG TCTGCAGGAA TCGGAGATGA AGTACCGCTC CCTCTTTGAC TCCGGCCCCG ACCCCATTTT TGTCGTGGAC TGCAACACGG ACCGGATACT CGACGCCAAC CCCAGAGCCG AGGAGCTGTA CGAGTATTCC AAGGGCGAAC TGCTGGGCGT GTCTTTCATG GTGCTGGGAC ACGACCAGGT CCGGGAATGC CTGAACTCTC TCAATGAGGC GCAGACGAAC AGCGGCTGCG TCTATTATCC GAAGGTGCTG CACTACAAAA AGGGCGAACG CCCCTTTTAC GTCAACATGC ACGCCTGCCC CATCAGCTAC GGGGGCACTC ACGCCATGAT CGTGGCCGTG ACCGACATCA CCGAGATGAT GGAGAAGGAC GCACAGCTCG TGCAGGCGGC CAAGATGAAG ACTCTGGGCG AAATGAGCGC GGGCATCGCC CACGAGATCA ACCAGCCCTT GAACGCCATC AAGATGGGCA GCGAGTATCT GAACCTGCTC ATCGAGCAGA ACCGGCAGGT GACCGAAACC CAGATCCGGG ACATGGCCAC GGAAATCAGC CAGCAGGTGG ACCGGGCCAC GGACATCATC AACAACCTGC GAGCCTTCGG CAAAAAGTCC GGACTGGTCA TGGAGCGGGT GGACATGAAC GAGCCCATCC GTGGGGTGCT GTCCATCATC GGCCGTCAGT TCTCCATCCA GCGCATCACC ATCCGCCTGG AGCTGGGCGA GGGCTTGCCG TACATCAAAG GGCACAACAA CCGGCTGCAG CAGGTTTTTT TCAACCTGCT CAACAACGCC CGTGACGCCA TCCAGGAGAA GATGGAAAAT GAGCCCGGCA TGTGGGGCGA TATCCTGGTG CGTACCTATA CCCAGGACGG CCGCGTTTTT GCATCCTTTG CAGACAACGG CCCCGGCATA GCCGATTCGG TCCGCAATAA GATCTTCGAG CCTTTTTTCA CCACCAAGCA GACCGGCAAG GGCATGGGGC TCGGCCTCGC CATAACATAT GGCATTGTTC GGGATTATGG CGGAATCATT ACTATTGACA GCCAGCCGGG TCAGGGGACA ACGTTCATCT TAAGTTTCCC GAGCGTCGAA AGTCATCAGG CGCTTGAGCA TAACGCAAGC CGAGTGGACG AGAACCCGGC ACAACCCAGC GAGATATCCT AA
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Protein sequence | MKPYARISLK NKIFASILAV ILIISVTIAL LARWILISGL TKELELRGIA VAHSIAERGG GFVLDKNYSE LLSLIFEEAR LRERQHMINY IFVLDRSEKV LSHTFTVPFP GPLSTANPVL EGKMNSVRLV AVGAQTSYDI AVSMNEGLYR IGTVHVGLSK EHIDKLVSKL RFMFLGFISA VIIIIFYVSH RISRYITSPI SRLTNISDEL SRGNFDVHLD LGEDLDWAVT NCPAYKDTNM PCWHFDEQGR KSLKSKGKTG QVCATCLFYR KREGDEVIQL ADSFMSMVWS IRLYRKRLQE SEMKYRSLFD SGPDPIFVVD CNTDRILDAN PRAEELYEYS KGELLGVSFM VLGHDQVREC LNSLNEAQTN SGCVYYPKVL HYKKGERPFY VNMHACPISY GGTHAMIVAV TDITEMMEKD AQLVQAAKMK TLGEMSAGIA HEINQPLNAI KMGSEYLNLL IEQNRQVTET QIRDMATEIS QQVDRATDII NNLRAFGKKS GLVMERVDMN EPIRGVLSII GRQFSIQRIT IRLELGEGLP YIKGHNNRLQ QVFFNLLNNA RDAIQEKMEN EPGMWGDILV RTYTQDGRVF ASFADNGPGI ADSVRNKIFE PFFTTKQTGK GMGLGLAITY GIVRDYGGII TIDSQPGQGT TFILSFPSVE SHQALEHNAS RVDENPAQPS EIS
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