| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0971 |
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| Symbol | |
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| ID | 8376629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 1051185 |
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| End bp | 1054220 |
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| Gene Length | 3036 bp |
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| Protein Length | 1011 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645000210 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_003157502 |
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| Protein GI | 256828774 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.893461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGG GAAGAAGAGA ATTCGTCAAA CTCACGGCCG CTGCGACAGC GGTCACGGCC
TTCGGGGGCC TCGGGTTTGA CCTGGCGCCG ACCAAGGCCC ATGCTCAGCT TTTGAGCTTG
CGCAAAGGCA AGGAAACCAC CTCGGTCTGC TGCTACTGTT CGGTAGGCTG CGGACTCATC
GTCACCACCG ACGAGAAAAC AGGGCGCGCC ATAAACATCG AAGGCGACCC GGATCATCCC
ATCAACGAAG GCGCCCTCTG TGCCAAAGGC GCGGCCATTT ACCAGCTGGC GGAAAATCCC
CAGCGCATCA CCAAGGTGCA GTACCGTGCA CCCGGCAGCG ACAAGTGGGA AGAAAAGAGC
TGGGATTGGG CCATCACGGA GATCGCCAAG CGCGTCAAGA AAGTCCGTGA CGAATCCTTC
ACCGAAAAGA ACGCCAAGGG CGAAGTCGTC AACCGCACCG AAGGCCTGGC CTCCGTCGGC
TCGGCCGCCA TGGACAACGA GGAATGCTGG ATCTACCAGG CCTTCCTGCG CAGTCTGGGG
CTAACGTACA TAGAGCATCA GGCCCGTATT TGACACAGCG CAACTGTTGC GGCTCTGGCA
GAGTCGTTCG GACGCGGCGC GATGACCAAC CACTGGATCG ACTTCAAGAA CAGTGATTGC
ATTTTGATAA TGGGCAGCAA CGCTGCCGAA AACCACCCCA TCTGTTGGAA ATGGGTCACC
AGGGCGCAGG AAGCAGGCGC GACGGTCATT CACGTCGACC CGCGTTACAC CCGCACCTCC
TCCAAGTCGG ACATGTACGT TCCCCTGCGG TCGGGCTCCG ACATCGGTGT CCTGGGCGGC
ATGATCAAGT ACATTCTGGA CAATGACCTG ACTCAGAAGG AATACGTTCT CCACTATACC
AACGCCTCTT TTCTCGTTTC CAAGGATTTC AGCTTCAAGG ACGGCCTGTT CTCCGGCTTC
GACGAGGCTG GACGCAAGTA CGACAAGAAG TCCTGGGACT TTGAAATGGA CGAGAACGGC
GTGCCCAAGC GGGACATGAC CTTGAAAGAT CCCCGCTGCG TGTATCAGAT CCTGAAAAAA
CACTACGAGC GTTACGACTC CAAGAAAGTT TCCGCCATCT CCGGTTCTCC CGAAGACCAG
CTGCTGGCCT TCTACAAGGC GTACACCGCC ACGGGCAAAC CGGACAAGGC AGGCACCATC
CTGTATGCCA TGGGCTGGAC CCAGCACACC GTCGGCGTGC AGAACATACG CGCCATGAGC
ATCATCCAGC TGCTGCTGGG CAACATGGGC GTGGCCGGCG GCGGCGTGAA CGCGCTGCGC
GGCGAATCCA ACGTCCAGGG CTCCACCGAC CAGGCCCTGC TCTTCCACAT CATCCCCGGT
TACATGGCCA CCCCGCGTGC CAACTGGGCG ACCCTGGAAG ACTACAACAA GGCCAACACT
CCGGTCAGCA AGGACCCCAA GAGCGTCAAC TGGTGGCAGC ACAAACCCAA GTACTTAGCC
AGCCTGCTCA AGTCCTTCTA CAAGGAAGCC GACCTGCCCA CCGCCTACAC CTGGATGCCC
AAGCTCGATG TAGGACAGAA TGCCTCCTGG CTGGTACTCT TCGATAAGAT GCTCAAAGGC
CAGTTCAAGG GCTTCTTCGC CTGGGGCATG AACCCCGCCG CCAGTGGCGC GGACTCCAAC
AAGACCCGCG AAGCCCTGTC CAAGCTGGAC TGGATGGTCA ACGTCAACTT GTTCGAGAAC
GAGACTGGTT CCTTCTGGAA GGGCCCGGGC GTTGATCCCA AGAAGATCAA GACCGAAGTC
TTCTTCCTGC CCTGCTCGGT CTCGGTAGAA AAGGAAGGCT CCATCTCCAA CTCCGGCCGC
TGGATGCAGT GGCGCTACGC CGGTCCCAAG CCCATGGGCG AGTCCAAGCC CGACGGCGAC
ATCATCTATG AACTGGCGCT CAAAATCCGC GAGCTGTACG AGAAGGAAAA GGGCGCGTTC
CCCGATCCGG TCCTCGGCCT CAACGTCGAC GATTGGGGCG ATGGACACGT TTTCGATCCG
CACAAGGTCG CAAAGCTCAT CAACGGTTAC TTCCTGAAAG ACACGACCAT CAAGGGCGCT
GACGGCAAGG AAACCGTGTA CAAAGCGGGC AGCCAGGTTC CGAGCTTCGT GATGCTGCAG
GCCGACGGCT CGACCTGCGC CGGTAACTGG ATCTACACCG CCTCCTACAC CGACAAGGGC
AACATGTCCG AACGCCGCGA CAAGACCCAG ACCCCGGAAC AGGCCAATAT CGGCCTCTTC
CCCGGATGGA CCTGGTCCTG GCCGGTCAAC CGCCGCATCA TCTACAACAG GGCTTCCGTC
GACATGACCG GCAAACCCTG GGCACCGCAG AAGCCTGTCC TGGCATGGGA CGGCGCGAAC
AAGAAGTGGC TCATCGACGT GGTCGATGGC GGCGGAGACG CAGGCGCCAA GTATCCCTTC
ATCATGCAGA AGCATGGCGT GGGACAGATC TATGGCCCGG GCCTCAACGA CGGTCCGTTG
CCCGAATACT ACGAACCCCT GGAATGTCCG GTCACCGAGC ATCCCTTCTC CACGCAGCTC
AACAGCCCCA CGGCCCTCAT GTTTGCCGAA GACGCTCACA AGCGCACCAC CTGCGACCCG
CGCTTCCCGT TCGTGTGCAC CTCGTACCGG GTCACCGAGC ACTGGCAGAC GGGCGTACTG
ACCCGCTGGC TGCCCTGGCT GACGGAAGCC CAGCCGCAGA TGTTCTGCGA AATGAGCGAG
GAACTGGCTG AACTCAAAGG GATCAAGAAC GGCGAAAAGG TCATTCTGGA GAATCCGCGC
GGACAGCTCT GGGCCATCGC CATCGTCACC AAGCGCTTGA AGCCTTTTGA CGTCATGGGC
AACCCTGTCC ATGTCGTGGG TATCCCCTGG CACTACGGTT GGGTCTGGCC CAAGGACGGC
GGGGATGCGG CCAACCTGCT GACTCCTGCT GTCGGCGATC CGAACACCGG CATCCCGGAA
ACCAAGGCCT TCATGGTCAA CGTGAAGAAA GCGTAA
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| Protein sequence | MKLGRREFVK LTAAATAVTA FGGLGFDLAP TKAHAQLLSL RKGKETTSVC CYCSVGCGLI
VTTDEKTGRA INIEGDPDHP INEGALCAKG AAIYQLAENP QRITKVQYRA PGSDKWEEKS
WDWAITEIAK RVKKVRDESF TEKNAKGEVV NRTEGLASVG SAAMDNEECW IYQAFLRSLG
LTYIEHQARI UHSATVAALA ESFGRGAMTN HWIDFKNSDC ILIMGSNAAE NHPICWKWVT
RAQEAGATVI HVDPRYTRTS SKSDMYVPLR SGSDIGVLGG MIKYILDNDL TQKEYVLHYT
NASFLVSKDF SFKDGLFSGF DEAGRKYDKK SWDFEMDENG VPKRDMTLKD PRCVYQILKK
HYERYDSKKV SAISGSPEDQ LLAFYKAYTA TGKPDKAGTI LYAMGWTQHT VGVQNIRAMS
IIQLLLGNMG VAGGGVNALR GESNVQGSTD QALLFHIIPG YMATPRANWA TLEDYNKANT
PVSKDPKSVN WWQHKPKYLA SLLKSFYKEA DLPTAYTWMP KLDVGQNASW LVLFDKMLKG
QFKGFFAWGM NPAASGADSN KTREALSKLD WMVNVNLFEN ETGSFWKGPG VDPKKIKTEV
FFLPCSVSVE KEGSISNSGR WMQWRYAGPK PMGESKPDGD IIYELALKIR ELYEKEKGAF
PDPVLGLNVD DWGDGHVFDP HKVAKLINGY FLKDTTIKGA DGKETVYKAG SQVPSFVMLQ
ADGSTCAGNW IYTASYTDKG NMSERRDKTQ TPEQANIGLF PGWTWSWPVN RRIIYNRASV
DMTGKPWAPQ KPVLAWDGAN KKWLIDVVDG GGDAGAKYPF IMQKHGVGQI YGPGLNDGPL
PEYYEPLECP VTEHPFSTQL NSPTALMFAE DAHKRTTCDP RFPFVCTSYR VTEHWQTGVL
TRWLPWLTEA QPQMFCEMSE ELAELKGIKN GEKVILENPR GQLWAIAIVT KRLKPFDVMG
NPVHVVGIPW HYGWVWPKDG GDAANLLTPA VGDPNTGIPE TKAFMVNVKK A
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