| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0958 |
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| Symbol | |
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| ID | 8376616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 1040476 |
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| End bp | 1041321 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645000197 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003157489 |
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| Protein GI | 256828761 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACAA CACCCGAAAC TTTTTCCAGC ACCTTCACCG TCGAAGAAGC CGCCCCGGCC
TGCGACACCC TGGCACGCCT GACCGGGCTG CCCAAGGCCC GCATCAAGGA CTGCATGGCC
AAGGGCGGCG TGTGGTGGTC CCGCCCCGGA CGCTCGACGT CCCGGCTGCG GCGGGCCTCC
GCGGAAGTCA AACCCGGCGA ACGCCTGGAG ATCAATTACG ATCCCGCCCT GCTGGCCCTG
GTTCCGGCCC AGCCGGAACT CATTGCCAAG GCCAAGCACT ATTCCGTCTG GAACAAGCCT
GCCGCAGTCC TGTCCCAGGG CACGCGTTTC GCGGACCACT GCACCCTGCC CCGTCTGGCC
CAGGCCAAGC TCGGCTCCAG AAACGAGCTG CACCCGGTCC ACCGCCTGGA CCGCGAAGCA
CGCGGGATCA TGCTCCTGGC CCACGACGGC AAGGCAGCCG CCAAACTGGG GGAACTTTTT
CGCCAAGGCG CGGTAGTCAA GGAATATGCG GCCATCGTGC GCGGCATTCC GGACTGGACC
GACATCGAGG TTAACGAGCC CCTGGATGGC AAAGAGGCGC GTTCTCGCTT TCATGTTGTC
CAAAGCGACC CCGCCTCCGA CATGACCCTG CTCCTCGCCC GCATCGACAC AGGCCGCAAA
CACCAGATCC GCCGCCACCT GAACGGCCTG GGACATCCCG TCATGGGCGA CCCGCGCTAC
GGTCGCGGCA CCAGACAGGT GCAGGAGCTG CAGCTTGTGG CCAGAAGCCT GGCCTTCACC
TGCCCGTTCA CGAACGCGCC CAAGCAATGG GCCGTGCCGG ATCTTCCCTT TCCCCTGACG
GACTGA
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| Protein sequence | MHTTPETFSS TFTVEEAAPA CDTLARLTGL PKARIKDCMA KGGVWWSRPG RSTSRLRRAS
AEVKPGERLE INYDPALLAL VPAQPELIAK AKHYSVWNKP AAVLSQGTRF ADHCTLPRLA
QAKLGSRNEL HPVHRLDREA RGIMLLAHDG KAAAKLGELF RQGAVVKEYA AIVRGIPDWT
DIEVNEPLDG KEARSRFHVV QSDPASDMTL LLARIDTGRK HQIRRHLNGL GHPVMGDPRY
GRGTRQVQEL QLVARSLAFT CPFTNAPKQW AVPDLPFPLT D
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