Gene Dbac_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0939 
Symbol 
ID8376597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1022812 
End bp1024182 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content67% 
IMG OID645000178 
Productexodeoxyribonuclease VII, large subunit 
Protein accessionYP_003157470 
Protein GI256828742 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0421457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATCT TCTCCGTCCG TACCCTCACC CAAGCCATCA AGGATGTCCT TGAAGGCGAA 
TTCCCGTTCG TCTGGGTCCG GGGACAGGTT TCCAACCTTT CTCGTCCGCC GTCCGGGCAT
GTGTATTTTT CCCTCAAGGA CGATGACGCC ACCTTGAGCG TGGTCTGGTT CAAGGGGGCG
CAGCCCAAGG GTTCCGTGGA CGGTGGCGAG CGGGTCAATC CTGTTACCGG CGAGGTGGAG
AGCGGGGAGC CTTTTGCGCT GTGCGATGGG CAGGAAGTGC TCGTGGCCGG GCGCATGAAT
GTCTATCCGC CGCGCGGGGC CTATCAGCTG GTGGCGGAGT TGGTGCAGGG GCAGGGCTTG
GGCGAGCTGG CCGTGGCCTT TGAGGCCATG AAGGCCAAGC TTGCCGCCAA GGGCTATTTC
GATCCGGACC GCAAAATGGT CCTGCCGCGC AATCCGCGCC GCGTTGCCGT GGTCACGGCT
CCCCAGGGCG CGGCCTTGCA GGATTTTTTG CGCATCGCGG ATGACCGGGG CTATGGGGCC
ACCATTCGGG TCTATCCGAG CCTGGTGCAG GGCGAGAGCG CTCCGGCGCA GATTGCCGCC
GCCCTGGACC GCGCCGACCG GGACGGGTGG GCCGAGGTCA TCGCGCTCAT TCGCGGCGGC
GGGTCCCTCG AAGACCTGTG GGCCTTCAAC ACCGAGCCCG TGGCCGAGGC CGTGTTCCGG
GCGCGGCTGC CGGTCGTGTG CGGCGTGGGG CATGAAGTGG ACACGAGCAT AGCCGATCTG
GTGGCGGACC AGCGCGCGGC CACGCCGTCG CATGCGGCGC AGATTTTGTG GACCGAACGC
GGCGTGCTGC GTCAGCAGGC CGACGAAATT TTTCTGGCTC TGACGCGCGG CATGGATCGC
CTGCTGGACC TGCGCGAGCG CGACCTGCAG CGCCATGCGC AGGGTCTTGC CTGGCATTCC
CCGGCCCGGC GCATCGAGCG CGGCGGCTTT GAACTGGAGC GCCTGGCTGG CCGTCTGCGG
CAGGCCATTC GCACGCAGGT GGAAAGCCGC GCCGCGACCC TGGTGCGTCT GGAGGATCGG
ATGTATCGAT CCTTTGGCCC GGCCGCGATG CTGTCGCTGC GTTCGGAACT GGACAGGGCG
CAAGGGGCCC TGGAACAGGT CGGAAGCCGC TTCGTGCGTG TCCGCCTGGA GAGTCTGCGC
GGAGTCGAGG GCCGTCTGGC CGCCCTGGAC CCTGCGGCCC CGCTGGCGCG TGGATACGCG
CTGGTCCGAG GTTCGGCCGG TTTTGTTCGT TCGCGGGAGG ATGTGCAGGC GGGGGATGAG
ATCCGGGTGC AGGTGGCGGA CGGAGAATTT TCAGCGGAGG TGCTGCCATG A
 
Protein sequence
MHIFSVRTLT QAIKDVLEGE FPFVWVRGQV SNLSRPPSGH VYFSLKDDDA TLSVVWFKGA 
QPKGSVDGGE RVNPVTGEVE SGEPFALCDG QEVLVAGRMN VYPPRGAYQL VAELVQGQGL
GELAVAFEAM KAKLAAKGYF DPDRKMVLPR NPRRVAVVTA PQGAALQDFL RIADDRGYGA
TIRVYPSLVQ GESAPAQIAA ALDRADRDGW AEVIALIRGG GSLEDLWAFN TEPVAEAVFR
ARLPVVCGVG HEVDTSIADL VADQRAATPS HAAQILWTER GVLRQQADEI FLALTRGMDR
LLDLRERDLQ RHAQGLAWHS PARRIERGGF ELERLAGRLR QAIRTQVESR AATLVRLEDR
MYRSFGPAAM LSLRSELDRA QGALEQVGSR FVRVRLESLR GVEGRLAALD PAAPLARGYA
LVRGSAGFVR SREDVQAGDE IRVQVADGEF SAEVLP