Gene Dbac_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0900 
Symbol 
ID8376556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp982441 
End bp983052 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content51% 
IMG OID645000138 
Producthypothetical protein 
Protein accessionYP_003157432 
Protein GI256828704 
COG category[R] General function prediction only 
COG ID[COG4262] Predicted spermidine synthase with an N-terminal membrane domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACATG CCTTCGATTT CCTCGTCTAC AGCGTGGCTT TTCTGTCCGG CGGGGTACTG 
CTTGGGCTGG AAATTGTAGC CAGTCGGATA CTGGCCCCGT ATTTCGGCAA TTCTGTCTAT 
GTCTGGGGAA GCCTGATCAG CGTCTTTCTG TTGGCCCTCA GTATCGGCTA CTGGCTCGGA 
GGGGGACTGG CCGACAGACG CCCGAGTCTG GTGGTACTGG CCAAGATACT GTCCTCTGCC 
GCGGTCTGCA TTCTGATTCT TCCGCTCGTC TATCTGCCGG TCGGTAGGTA TGTCGCGGAT 
CTGGGGCTTG AATTTCGGTT TTCCGTACTC CTGATCAGCG TGCTGTTCTT TTTGGTGCCG 
TCGGTGCTCA TGGGCATGGT TTCGCCTTTT GTGATCAAAT TGAGCGCTAC TGGGCTGGAC 
GAAATAGGCC GAACGGCTGG TCGGGTGTAT GCAATTTCGA CTTTGGGAAG CATTTCCGGA 
GCCATCGCTG TTTCATTTTT TTTCATTCAA TGGCTTGGAA CTCGTGCCAT AGTCGTTGTT 
CTTGGTCTTA TTCTCTTGTT TCTCGCCGTA ATCTGTATGG CTTATGAAAG AAAATTTCGT 
GATTCAATAT AA
 
Protein sequence
MRHAFDFLVY SVAFLSGGVL LGLEIVASRI LAPYFGNSVY VWGSLISVFL LALSIGYWLG 
GGLADRRPSL VVLAKILSSA AVCILILPLV YLPVGRYVAD LGLEFRFSVL LISVLFFLVP 
SVLMGMVSPF VIKLSATGLD EIGRTAGRVY AISTLGSISG AIAVSFFFIQ WLGTRAIVVV 
LGLILLFLAV ICMAYERKFR DSI