Gene Dbac_0888 details

Gene Information

• Locus tag: Dbac_0888
• ID: 8376544
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 970677
• End bp: 972740
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 645000127
• Product: integrase family protein
• Protein accession: YP_003157421
• Protein GI: 256828693

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00241878
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTCCAA GTGTTACACA AAGCTGTTAC ACAAGAGGCA TGAGAGCTTT GTCTTTATGT 
AACCATCTTC AACGCCGTGG CTCATCCGGG AACTATTATT TCCGGGTTCG CATCCCATCC 
GACATCTTGG AGGTTTATGC CCCCAAGAAA GAGATCGTCT TCAGCCTCAA GACCAAAGAC 
CCCAAGGAAG CCAAGGCCCG ATGCAGGGTT GAAGCTGTCC GCATTGACCA AGAGTTCGAC 
GAGCACCGTA GGCGGCTTGA GCTTGAGCGT CAGCAGCAGG AACAGCTTGC CCAGGCTCAA 
GGGGTAGGGG TGGCTTCATC CCCGGCGGCT CCTCTCACTG ATCTTGATTC CATTCCCGAC 
TACGAACTGG ACAGGCTTGC CGTTCTCTAC CTGCACGAAG TCCTGGCTCA TGATGAGCAG 
GAGCGGACGG CTGGAAGTTC GGAGGCCCGG AAGGAGTGGG AAGAGAACCA AGAGTTCCTT 
CGCCAACTTC ATGAACAGAA GGGAATGCCC TTCACACCTG AATCCTTCCC AACTCATGGT 
GTTGGCCTAT CTCCGTCAAC TATCCAACGT AAGCGTGAAC GTGCACGGCT CTTCCTCCAG 
GCAGGAGGGA GCTACCTTGC CAGCGGCGAT ATCTCCATCA TCCATGACAG GGCCTTGGCC 
TTCCTCGCTG CTCATGACCT CAAGGTTGAA GATCAAGTCG GTTCCCTTGC CTTCCGGCGG 
CTTTGCCTTT CGCTGATTCA GAAGGAGATG GATGCCCAGG AGGCCATTCT CAAACGGCTT 
GATGGTCAGT GGATACCAAC GCCTCCGGCA AGCCAGAGCG TTGCTTACAG CGGCTCTCAA 
AGCGCGACTG CTGGACTTGT CATAGGTGCT CCCGTGGTTC TTCAAGTGAA TGGCCAGGGA 
CAAATCGTAC AAGCCCAGAC GCAAGAGGCT TCCATGATTC CATCGGAGGA CAACCCCTGT 
CTGTCCACAA TATGGGAAAG CTACCTCAAG GAGAGGAAGC CAGCACCTAG CACCATTAAG 
AATTTTGAAG GTGCTGTCCG TCGCTTCATT GAGCTTGTTG GCGATCTTCC GGTGAAGGCT 
GTCACGAAGT CCCACTTCAG ACAGTACAAG GACGCCTTGC TCAAGTTTCC CGTTAGGCTC 
CCCCATTCCG TCCGCAAGAA GAGCATCCAG CAGGTCGTTG CCTTCGTGGA GAAGGAACGG 
CAGAAAGGGA CGGCCTTTGA ATTGCTGAAC TCTAAGACGA TCAACAACAA ATACCTTGGA 
GCATTGAAGG CGATACTGGC CCATGCCGTG GACAACGGAT TCATTGATGA CAACCCCGCC 
AATCAGATCA GGGTTACCCA CGATGCCGAC AAGCACGGCG ATAATGAACC GGCAACCCTA 
CCGTACACGG AAGAAGAACT GAACGTCCTG TTCTCATCAT CGTTCTTTGT CCCTGGCCAG 
GAGTGCAAGT TCAAGAAGCG GATGAAGCGT GACGCTGTGC TTGACTATCG GTGGCTTCCC 
ATAGTGGCCT TGTTCACTGG GGCTAGGCTT GAGGAGATTG GCCAGCTTGA TGTCGCTGAT 
GTCATGGAAG AGGATGGAGT GAAGTTCTTG TTCATCCATG CCGACCAGAG CACCGAACGG 
CGACTCAAGA ACAAGTCCTC CCGGCGCAAG GTTCCGATCC ATCCCCGGCT TGTGGAGCTA 
GGCTTCCTTG AGTTCGTGAA GTTGAGGAGT AAGCAGGGAG CGATTAAGCT GTTTTCCACG 
TTGAAGGAGA TGGGCGGGGC CAGGAAGGAC AAGAGGACCG ATGCCTTCTC CAAGTGGTGG 
AGGCGGTACA CGGAAGCGAT CGGCGTGAAG ACCGGGAAGC AGAAGACCTT CCATTCCTTC 
CGGCATACAT CCAAGAGGGC CTTGAGGAAC GCAGGGGTTG ATCCAAGCCT GACCGACGCG 
ATCCACGGGC ATACGAACAA GAGCATCTCG GCTCACTACG GCAGGGACAA GGACGGTATG 
GGGTATGCCT TGCCGGTGCT CCTTGAGGCG ATCAGTAGGG CTACAATGGA TCGGGTAATA 
ATTCATAACC CAGAGGGAAA CTAA 

 

Protein sequence

MLPSVTQSCY TRGMRALSLC NHLQRRGSSG NYYFRVRIPS DILEVYAPKK EIVFSLKTKD 
PKEAKARCRV EAVRIDQEFD EHRRRLELER QQQEQLAQAQ GVGVASSPAA PLTDLDSIPD 
YELDRLAVLY LHEVLAHDEQ ERTAGSSEAR KEWEENQEFL RQLHEQKGMP FTPESFPTHG 
VGLSPSTIQR KRERARLFLQ AGGSYLASGD ISIIHDRALA FLAAHDLKVE DQVGSLAFRR 
LCLSLIQKEM DAQEAILKRL DGQWIPTPPA SQSVAYSGSQ SATAGLVIGA PVVLQVNGQG 
QIVQAQTQEA SMIPSEDNPC LSTIWESYLK ERKPAPSTIK NFEGAVRRFI ELVGDLPVKA 
VTKSHFRQYK DALLKFPVRL PHSVRKKSIQ QVVAFVEKER QKGTAFELLN SKTINNKYLG 
ALKAILAHAV DNGFIDDNPA NQIRVTHDAD KHGDNEPATL PYTEEELNVL FSSSFFVPGQ 
ECKFKKRMKR DAVLDYRWLP IVALFTGARL EEIGQLDVAD VMEEDGVKFL FIHADQSTER 
RLKNKSSRRK VPIHPRLVEL GFLEFVKLRS KQGAIKLFST LKEMGGARKD KRTDAFSKWW 
RRYTEAIGVK TGKQKTFHSF RHTSKRALRN AGVDPSLTDA IHGHTNKSIS AHYGRDKDGM 
GYALPVLLEA ISRATMDRVI IHNPEGN