Gene Dbac_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0880 
Symbol 
ID8376535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp961655 
End bp962410 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content60% 
IMG OID645000119 
Producttriosephosphate isomerase 
Protein accessionYP_003157414 
Protein GI256828686 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TGCTCATGGC CGCCAATTGG AAGATGTACA AGAGCGTGGA AGAGGGCGTG 
GCCACGGCCA GGGAACTGGT CTCGCTGCTC GACAAACTGC CCGAGGACAG GGAAGTGCTC
GTCTGCCCGT CTTTTATCAT GATGCATTCC GTGTGTCCCA TTCTTGCGCA GAAAGCGGGA
TGTTACGCCG GAGCCCAGAA TTTCTATCCC GCTGCCCAGG GGGCTTTTAC AGGTGAAGTC
GCGCCTGAGC AGCTTATGGG CCTGGGCTGC ACGCATGCCC TGGCAGGACA CTCCGAGCGC
AGGCACGTCC TGGGCGAAAT GGATGAGCTT ATCGGGCGCA AGGTGGCATT TGGACTGGAT
GCCGGGCTCA AGATGATCCT GTGCATCGGC GAGACCATTG TCGAGCGGCG ACTGGGACAG
ATCGAGGAAG TTTTGGCGCG CCAACTCGAA AGCGGGCTGG CCGGAGTGCT GTCCACCGCC
ACTGCACAGA ACTTGGCTGT GGCCTACGAG CCGGTCTGGG CCATCGGCAC GGGCGAAGTC
GCCGGACCCG ATGAGATTCT GGCCGCGCAT GCCTTTGTGC GTGCCACGCT CACGTCGTTG
TTGCCCAAAG AGGGCGCTCA AATCCGCATT CTTTACGGCG GTTCCGTCAA GCCGGACAAC
GCCGCGACCA TCATCCGCCT TGACAATGTG GACGGTGTGC TGGTAGGCGG CGCAAGTCTC
AAAGCGGACA GTTTCAGTCA GATCGTGCTC GCATAA
 
Protein sequence
MKKLLMAANW KMYKSVEEGV ATARELVSLL DKLPEDREVL VCPSFIMMHS VCPILAQKAG 
CYAGAQNFYP AAQGAFTGEV APEQLMGLGC THALAGHSER RHVLGEMDEL IGRKVAFGLD
AGLKMILCIG ETIVERRLGQ IEEVLARQLE SGLAGVLSTA TAQNLAVAYE PVWAIGTGEV
AGPDEILAAH AFVRATLTSL LPKEGAQIRI LYGGSVKPDN AATIIRLDNV DGVLVGGASL
KADSFSQIVL A