Gene Dbac_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0856 
Symbol 
ID8376511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp928833 
End bp929849 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content59% 
IMG OID645000095 
Productphosphonate ABC transporter, periplasmic phosphonate-binding protein 
Protein accessionYP_003157390 
Protein GI256828662 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.409063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAGG GTTTCTTGGG CTTTTTGGCT GCGGTGCTGA TCCTGGCCTT CGCGGGCCTC 
GCGTTTGCGG AGGAATGTTC CAATCGCGGC ATACTGGACA CCATGTATTG CGACAACGAC 
AAGGATCTGG TTGCCGACAA CGCGCCTGCC GGCGAATGCA AGGATCCTTC GACTCTGGTT 
TTCACCTACA CCCCGGTGGA AGATCCCGCC GTGTATCAGG ACCTGTTTGC GGACTTCCAG 
GCGCACATCA AGAAGGTCAC GGGTAAAGAC GTGATTTATT ACACCGTGCA TTCCAACTCG 
GCCCAGGTCG AGGCCATGCG CTCCGGCCGC CTGCACATCG CTGGCTATTC CACCGGCCCC 
ACCGGCTTTG CCGTGAATCT GGCCGGTTAT GTGCCCATCG CCGTCAAGGG CGACGAAAAG 
GAATTTCAGG GCTACAATCT GATCGTCATC GTCAAGAAGG ACAGCCCCAT CCAGACCATG 
GCCGACCTCA AGGGCAAGAA GGTCGCGCAC ACCTCGCCCT CGTCCAACTC CGGCAACCTG 
GCACCCCGCG CCTTGTTCCC GGCCCAGGGC ATAGTGCCCG ACGAAGATTA CACTGTCGTC 
TACTCCGGCA AGCATGACCA GTCCGTACTG GGCGTGGTGC ATGGCGACTA TGACGCCGCC 
CCCGTGGCTT CCGACGTTTA CGAGCGCATG CTGCGCGCCG GCCGTGTCGA TGAAGGTGCC 
GTTCGGATCA TCTTCACCAG CCCCCGTTTC CCCACGTCGT CCTTCGGCTA TTCCAGCCAG 
CTGTGCCCGG AACTGGTCGA GAAGATCAAG GAAGCGTTCT TCTCCTATCG CTACACCGAA 
GAGATGAAGA AGGCCTTTGA CGGCGCGGAT CGTTTCTTCC CCATCACCTA CCAGAAGGAT 
TGGGCGGTCA TTCGCGACAT CGCCGAAGCC ACGGGCGCAA GCTACAATGA AGAAGGCCTG 
CAGGCCATGA TCGCCAAGGA AAAGGCGGAC GCGGAAAAGA AAGCCAAGAA GCAGTAA
 
Protein sequence
MQKGFLGFLA AVLILAFAGL AFAEECSNRG ILDTMYCDND KDLVADNAPA GECKDPSTLV 
FTYTPVEDPA VYQDLFADFQ AHIKKVTGKD VIYYTVHSNS AQVEAMRSGR LHIAGYSTGP 
TGFAVNLAGY VPIAVKGDEK EFQGYNLIVI VKKDSPIQTM ADLKGKKVAH TSPSSNSGNL 
APRALFPAQG IVPDEDYTVV YSGKHDQSVL GVVHGDYDAA PVASDVYERM LRAGRVDEGA 
VRIIFTSPRF PTSSFGYSSQ LCPELVEKIK EAFFSYRYTE EMKKAFDGAD RFFPITYQKD 
WAVIRDIAEA TGASYNEEGL QAMIAKEKAD AEKKAKKQ