| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0852 |
|---|
| Symbol | |
|---|
| ID | 8376507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 925098 |
|---|
| End bp | 926054 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645000091 |
|---|
| Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein |
|---|
| Protein accession | YP_003157386 |
|---|
| Protein GI | 256828658 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAAT TGGATGATCT CAAAAATGCC ATCAAGAGCC ACCTCGGCGA GCTTGAGTGC
GTCATCGGCT GGGAGCAGGG TTATGACCCG CTTCACGCCA CGCCGCTCTT CATCCGCACC
GAGGCGGATC TGGACCGGCT TATCATAGGC CCCCTGGCCG TGCACAATCT GGTCACCTAT
TTGACCGGGT TCAAGGGCAA GAAGATTGGA GTGGTGGTCA AGGGCTGCGA CAGCAAGAGC
GTGATCCAGC TTTTGAATGA AAATCTGATA AAACGCGACG AGGTCGTCAT TTTCGGCCTG
TGCTGCGACG GCGTGGTCAG CCAGCGCAAG ATCCGCGCGG CGCTGCCTGC CGATCCGGGC
TTCGTGGAGT CGGTGGATAT CGGCGGGGGC GACCTCAAGA TCACCGTGGC CGGTCAGGCC
GCGACCTTGA AACTCTCCGA AGTTCTGGCC GACAAATGCC TGATCTGCGC CACGCCCGAC
GCCATCATCT CCGATGTGCT GATCGGCGCG CCGCATACTC CGACCCCGGC CGCGAGCCTG
GCCTGTCAGG ACGAATTCGA GGCCAAGTCT GATGCCGAGA AGCTCGCCTT CTGGCAGGAA
ACCATGAGCC GCTGCATTCG CTGCTATGCC TGCCGCAACG CTTGCCCCAT GTGTGTCTGC
CGCGACCACT GCATAGCGAC CAGCCGCGAC CCCTTGTGGA TCAGCCAGGA CAATTCCCCG
GCCGAGAACA TGATGTTCCA GATGGTGCAT GTCTCGCATC TGGCCGGACG CTGCACGGAA
TGCGGTGAAT GCGAGCGGGC CTGTCCCGTG GACATCCCGC TCATGCTGCT GCGGCGCTGG
ATGAACAAGC AGGTCAAGGA CGTGTTCGAA CTGCAGGCAG GCATGGCTCT GGAACAGACC
CCGCCTCTCT TGACCTTCAA GGTCGAGGAA GAGCGCATCA ACGAGCGAGG CTGGTAA
|
|---|
| Protein sequence | MSQLDDLKNA IKSHLGELEC VIGWEQGYDP LHATPLFIRT EADLDRLIIG PLAVHNLVTY
LTGFKGKKIG VVVKGCDSKS VIQLLNENLI KRDEVVIFGL CCDGVVSQRK IRAALPADPG
FVESVDIGGG DLKITVAGQA ATLKLSEVLA DKCLICATPD AIISDVLIGA PHTPTPAASL
ACQDEFEAKS DAEKLAFWQE TMSRCIRCYA CRNACPMCVC RDHCIATSRD PLWISQDNSP
AENMMFQMVH VSHLAGRCTE CGECERACPV DIPLMLLRRW MNKQVKDVFE LQAGMALEQT
PPLLTFKVEE ERINERGW
|
|---|
| |