Gene Dbac_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0828 
Symbol 
ID8376483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp898666 
End bp899631 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content57% 
IMG OID645000067 
Productphosphonate ABC transporter, periplasmic phosphonate binding protein 
Protein accessionYP_003157362 
Protein GI256828634 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.371996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCGCA AACTATGTGG CCTGTTCATC CTACTGGCGT TTTTTGGCGT CCAGACCGCT 
TCCGCCGAGA TGAAAGAAAT CAACTTCGGC ATCATTTCCA CCGAAGCTTC CATGAACCTG 
AAAACCATTT GGCAGCCTTT CCTTTCCGAT ATGGAAAAGG CCACCGGACT AAAAATCAAC 
GCGTTCTTCG CCTCCGACTA TGCCGGAATC ATCGAAGGCA TGCGCTTCAA CAAGGTGCAG 
GTGGCCTGGT ACGGCAACAA AAGCGCCATG GAAGCCGTGG ACCGCGCCGA TGGTCAAATC 
TTCGCCCAGA CCGTGCCCGC CGACGGAGAA GCCGGATACT ATTCCCACCT CATCGTGCAC 
AAGGATTCCC CGCTGAACTC ACTGGAAGAC GTGCTCAAGA ACGCCGCTTC CCTCTCTTTT 
GGCAACGGCG ACCCCAACTC CACCTCCGGC TTTCTCGTGC CCAGCTACTA CGTGTTCGCG 
GTGAACAAGG TCGATCCCAA GAAGATCTTC AAGAACGTGG TTTCCGCGAA CCACGAGACC 
AACGCCTTGA GCGTGGCCAA CAAGCAGGTC GATGTGGCCA CCAACAACAG CGAAAACCTG 
GCTCGACTGA ACGTGACCCA CCCCGACAAG CGCGGCCTGA TCAAGGTCGT GTGGACCTCC 
CCGCTCATCC CCAGCGATCC GCTGGTCTGG CGCAAGGATC TGCCCGAAGC CACCAAGGCC 
AAGCTCAAGA ATTTTCTCAT GACCTACGGC ACCACCGGCA AGGAAAGCGA AGTCGCCGTG 
CTGAAGGCCC TGGGCTGGGC TCCGTTCAAG GAATCCAACA ACGACCAGCT TCTCCCCATC 
CGCCAGCTCG AACTCTTCAA GAAGCGCGTC AAGGTTGAAG GCGATACGGC CATATCCGCC 
GAAGAAAAGA CCAAGACCCT CGCGGAAATC GACGCCAAGC TCGACGCCAT CAAAGCCAAA 
ATCTAG
 
Protein sequence
MFRKLCGLFI LLAFFGVQTA SAEMKEINFG IISTEASMNL KTIWQPFLSD MEKATGLKIN 
AFFASDYAGI IEGMRFNKVQ VAWYGNKSAM EAVDRADGQI FAQTVPADGE AGYYSHLIVH 
KDSPLNSLED VLKNAASLSF GNGDPNSTSG FLVPSYYVFA VNKVDPKKIF KNVVSANHET 
NALSVANKQV DVATNNSENL ARLNVTHPDK RGLIKVVWTS PLIPSDPLVW RKDLPEATKA 
KLKNFLMTYG TTGKESEVAV LKALGWAPFK ESNNDQLLPI RQLELFKKRV KVEGDTAISA 
EEKTKTLAEI DAKLDAIKAK I