Gene Dbac_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0793 
Symbol 
ID8376448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp869426 
End bp870541 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content62% 
IMG OID645000033 
Productpyridine nucleotide-disulfide oxidoreductase family protein 
Protein accessionYP_003157328 
Protein GI256828600 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID[TIGR03169] pyridine nucleotide-disulfide oxidoreductase family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.856458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAGA AACTGCTTCT GGCCGGCGGC GGCCATGCAC ATATGACCAT CCTGGCCCAC 
ATGCGCGATC TGATCCGGGA AGGACACGAA GTCACCGTCG TCCAGCCCTC CGATTACCAC
TACTACTCCG GCATGGGGCC GGGCATGCTC GGCACGACCT ACACCCCGGC CGAAATCCGT
TTCGCGACCC GCCATGTGGT CGAGGGCATG GGCGGGAGCT TCGTACGGGA CAAAGTCGTG
CGCATAAACG CCGACCAACG CCAGGTCACC CTGGCTTCCG GCCAGATCAT GGACTACGAT
GTGCTGTCCT GCAACGCGGG CAGCTTCATC CCCTTCGACA CTATCCACGG CGACACCTCG
AACGTGTTCA CGGTCAAGCC CATCGAACGC CTGCAGGAGG CGCAGCGGGC CGTGATCTCG
CTTTGCGCCA CGCGCACCCG GCCTCATGTG GCCGTGGTCG GAGGCGGTCC GGCCGCCCTT
GAAATCGCCG GCAACGTGCG CAAGCTGGCC AAACTCAAAG GGCGGCACGA GCCGCGCATC
ACCCTTTTCG CCGGCCGGAA ACTGCTTGGC CGCTTTCCGG AAAAAATCGG AAAACTGGCC
CGCGAATCCT TTGCCCGCCA GAACATCGAG ATCAACGAAG ACGGCTATGT GGACGAAATC
AGTAATGGCG TCATCGTCCA GGGCCAAAAG CACCACCACC CCGACCTCAT CTTCGTGGCC
ACGGGTGTGA GGCCCTCGCG CATCTTCGCC GACTCCGGGC TGCCCACCGG CATCACGGGC
GGGCTCCTGG TCAACGAATG GTTGCAAAGC GTGGAGCACC CCGAAATTTT CGGCGGCGGC
GACTGCATCG ACTTCGAGCC CAAAGCCCTG GACAAGGTCG GCGTCTATGC GGTGCGCGAA
AACCCGGTCC TGCTGCGCAA CGTGCGCGCC GCCTTGAACG GGACCAGGAT GCAGCGCTTC
GATCCCGGCG GAAAATATCT GCTTCTGTTC AACATGGGCG ACGACACGGC CATCTTCAGC
AAAGGGGGAT TCATCTTCTG CAACTGGCTG GGATTTTTAC TTAAAGACTA CATCGATCGC
CGCTTCATGC GTCATTTCCA GGCTCTTGGA CGCTGA
 
Protein sequence
MGKKLLLAGG GHAHMTILAH MRDLIREGHE VTVVQPSDYH YYSGMGPGML GTTYTPAEIR 
FATRHVVEGM GGSFVRDKVV RINADQRQVT LASGQIMDYD VLSCNAGSFI PFDTIHGDTS
NVFTVKPIER LQEAQRAVIS LCATRTRPHV AVVGGGPAAL EIAGNVRKLA KLKGRHEPRI
TLFAGRKLLG RFPEKIGKLA RESFARQNIE INEDGYVDEI SNGVIVQGQK HHHPDLIFVA
TGVRPSRIFA DSGLPTGITG GLLVNEWLQS VEHPEIFGGG DCIDFEPKAL DKVGVYAVRE
NPVLLRNVRA ALNGTRMQRF DPGGKYLLLF NMGDDTAIFS KGGFIFCNWL GFLLKDYIDR
RFMRHFQALG R