Gene Dbac_0743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0743 
Symbol 
ID8376397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp820045 
End bp822654 
Gene Length2610 bp 
Protein Length869 aa 
Translation table11 
GC content59% 
IMG OID644999984 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_003157280 
Protein GI256828552 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAT CCGCTGAAGC GCCTGTACCA GCAGTTTCCC TGTTGCGCGG GACCTTGGCC 
GTATGGTTGC TGGTCCCATG CATCATTGTC GTCTTCGCTC TCGGACTCGC CCTGCTCGCG
GAAGGCGTCA ATAATGCCAG AGAAACCAAC GAACACTTGG CGACCGCGCT CTGCCGCTAC
CTCGACATCT TCGTTTCGGA TGCTCATTCG AACCTCGCCT CACTTGCACG GCTTGAGGGC
AGGAGCGATC CCGACCACTT CCACGCAGCC ATCAGGCAGA CGCAGGAATC CCTGACCCGT
TTCCAGCGCA TCGTCCTGGT CGATGCGGAC GGCATCGTGC GGTTCACACA CCCGCCTGGG
TTCGTGGGAG TGGACTTCCC TGTCCTCTTT CCTTCGGAAT CGAACTCGAC CATGTCCCGG
CCGCTCTATT CTTCTGCTAC GGGCAGTCTG ACTATCCTCA TGCGGGCGAA AACCGTTTCG
GGGAAAATGA TAGCCGGGGA GCTCAATCTT GACGCCCTGC TTGAACATCT GCAACATTTT
TCGTTGGACC TTCACGGAAC AGTGGTGGCA GTCACCGACG GATTCGGCAA CCTCATCGCG
CACCCGGACA TGGCCCTAGT GCGCCAGCAG ACCAACATAG GAGACTGGCG CATATTCAAG
GAGGCTTCCG AAGCAGAGAC GTTCAGCGCC CTAGCCTTCA GGGACCGCAG CTTCGTGTCC
GACACCGTCG CCCAATTGCC CGGACACCAG TGGAAGGTCA TCCTGTCCAC GAGCCTATGG
CAGGCCATGT CCGACACCCT CAAGATCGTG GCGACCATCG AGATCCTTCT GGTCGCCTAC
TTCTTGATCC TCTTCCTCTC GGTAAGGCGG ACCCTGAATC TGCGGATCAT ACGCCCGATC
GTGGAGTTCT CAAAGTCCAT GACCGGACTG GCTGCCTCGC AACAGCCCGC CCCGCCTGAG
CCGGCTCCCT TCCAGGAACT GGGCCTCATC GAACGGGAAT TCCGTCAGGC CATTTCGGCC
ATCCTGGAGA GTCAAGCACG GCTGCGCACA AGCCAGGCCA TCCTGGAGCA GGCCCAAAAT
ATAGGCCACA TGGGCAGCTG GCAGCTGGAC CTGACCGACA ACCGCCTGAC ATGGTCGGAC
GAGGCCTACC GCATCTTTGG CGCGACGCAG GAAGACTTTG AGCCTAGTTA CGAGCGGTTC
CTGGCCATCG TGCACCCCGA CGACCGCGCC GCCGTTGAAC ATGCTTATGC CTCCTCCATC
GAGGAAAGCA GGGAAAGCTA CGAAATCGAG CACCGCATCG TGCGCAGGGA CGATGAAGAA
ATCCGTTTTG TGATCGAACG CTGCGTCCAT GAGCGGGATG CCCTAGGCAC GGTCATCCGC
TCCGTCGGCA TGGTGCAGGA CATCACCGAC CGCAAGAATG CGGAACAAGC GTTGGAGAGA
GCCAAGGAGG CCGCCGAGTC GGCCAGCCAG GCCAAATCGG AATTCCTGGC CAACATGAGC
CATGAAATCC GAACCCCTCT GAACGGCGTA ATGGGAATTC TCCAGTTGCT GGAAACCTCG
GCCGAAGGCC AGGAACAAAA ACAGTTCTGC ACGCTCGCCC TGCAATCAGC CAATCGTTTG
AACCGGCTCC TTTCGGATAT TCTCGACCTG TCGCGGGTAG AGGCTGGAAA ACTGCATATC
CAGTCCGAAC CCTTCAGATT GCATGAAACT CTTGTCCAGG TGTTGGACCT TTTCGTGCCC
ACGGCAGTCC AGTCAGGGGT GGAACTCAGG CATCACGTCG ATCCGGGCCT GCCGAACTCC
ATCGTCGGGG ACCCCATTCG CCTGCAGCAG GTGCTGGGCA ACCTCATCGG CAACGCCTTC
AAGTTCACCA CGACCGGCTA CGTCAATGTC GAGGCCTACC CCCTGCCCGC GAAACACCCA
GGCCAGCTTC GTATCTTCTT CTCGGTTTCG GACACCGGGT GCGGTATTTC CGACAAGGAT
CTCAAGAACC TGTTCACCCC ATTCACTCAG GTCAGCCAAG GGTACGCCAA GAGCCATCAG
GGCGCTGGGC TGGGCCTCTC CATCTGCAAG CATCTCGTGA CCCTCATGGG CGGGAATATG
GCCGTCGAAA GCGAGACTGG AGTGGGGACG ACCTTCAGCT TCTGCGTGAC CGTAGGAAAG
GCCCTCGGCG TTGCTGTCGT AAAAGCCCCT GCAGAAATCG GGGCATCTGC CACGGCCAAT
GGCCGGGTAC TGTTGGCTGA AGACGACGAG GTGACACAAT TCGCTGTCCG TAAACTGCTG
GAAAAAGCGG GGTACACGGT GTCGATAGCC AGGAACGGCG AAGAGGCGTT GGATCTGCTC
GGCGCGCACG ACTTCGACGC AGTCCTCATG GACATCCAGA TGCCGGTGAT GGGTGGGATC
GAAGCCACCC GCCTCATCCG CAGTTCCGCT ACCCCGGAGG CGAAGCGAAG CATCCCCATT
ATCGCTCTGA CCGCTTATGC CATGGCCGGA GACCGGGAAA AATTCTTGGA TGCTGGCATG
AACGACTACA TCGCTAAGCC GGTGCAGGTC GTAGAACTCA AGAAGGCGTT GGAGCGGGCA
CAGAAGTTGG GGAAGGGCGA AGTGCAGTAG
 
Protein sequence
MKRSAEAPVP AVSLLRGTLA VWLLVPCIIV VFALGLALLA EGVNNARETN EHLATALCRY 
LDIFVSDAHS NLASLARLEG RSDPDHFHAA IRQTQESLTR FQRIVLVDAD GIVRFTHPPG
FVGVDFPVLF PSESNSTMSR PLYSSATGSL TILMRAKTVS GKMIAGELNL DALLEHLQHF
SLDLHGTVVA VTDGFGNLIA HPDMALVRQQ TNIGDWRIFK EASEAETFSA LAFRDRSFVS
DTVAQLPGHQ WKVILSTSLW QAMSDTLKIV ATIEILLVAY FLILFLSVRR TLNLRIIRPI
VEFSKSMTGL AASQQPAPPE PAPFQELGLI EREFRQAISA ILESQARLRT SQAILEQAQN
IGHMGSWQLD LTDNRLTWSD EAYRIFGATQ EDFEPSYERF LAIVHPDDRA AVEHAYASSI
EESRESYEIE HRIVRRDDEE IRFVIERCVH ERDALGTVIR SVGMVQDITD RKNAEQALER
AKEAAESASQ AKSEFLANMS HEIRTPLNGV MGILQLLETS AEGQEQKQFC TLALQSANRL
NRLLSDILDL SRVEAGKLHI QSEPFRLHET LVQVLDLFVP TAVQSGVELR HHVDPGLPNS
IVGDPIRLQQ VLGNLIGNAF KFTTTGYVNV EAYPLPAKHP GQLRIFFSVS DTGCGISDKD
LKNLFTPFTQ VSQGYAKSHQ GAGLGLSICK HLVTLMGGNM AVESETGVGT TFSFCVTVGK
ALGVAVVKAP AEIGASATAN GRVLLAEDDE VTQFAVRKLL EKAGYTVSIA RNGEEALDLL
GAHDFDAVLM DIQMPVMGGI EATRLIRSSA TPEAKRSIPI IALTAYAMAG DREKFLDAGM
NDYIAKPVQV VELKKALERA QKLGKGEVQ