Gene Dbac_0720 details

Gene Information

• Locus tag: Dbac_0720
• ID: 8376374
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 797510
• End bp: 798070
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 644999963
• Product: Tetratricopeptide TPR_2 repeat protein
• Protein accession: YP_003157259
• Protein GI: 256828531
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3063] Tfp pilus assembly protein PilF

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGTCGTG CATTCTTTCT TGTCTTCTTT TTGGTCCTTG CGCTGGCCGG TTGCGCCACG 
CCCAGGATCG TCGTGCTTTC CGACCCGCTG GACGCCCGCG AACACAACGA TCTGGGTGCC 
TCTTACGAGA CCTCCGGAGA ACTGGACCTG GCCCTCAAAG CCTATGAAAC GGCCGCGGCC 
AAGGATCGTT CCTGGGACCA GCCGCTTATC AATCTGGGTA ACGTGCATTC GGCCCAGGCT 
GATTGGACGC AGGCTGCGGC CAGTTACCGG CAGGCCCTGA AACGCAATCC CGAAAACTCC 
GAGGCCATGA ATAATCTGGC TTATGCGCTC GTGAACCTGG ATGAGCCGCG CGAGGCCCTG 
GAATGGTCCT CCAAGGCAGT GCAGGCCGAG CCCGGCAACC CGCTCTTCCG GGCGACCCTG 
GCCCAGGCCT TGGCGGGAAC CGGCGAGAGG GAGAAGGCGC TCGCGCTCCT TGACGAAACC 
CTGCAAACCC TTCCTTCCGA TGATCCCCTG CGTGAGAAGA TAGCCGCTCT GCGCGACCAG 
ATCGAAAACT CCGCCCCCTG A 

 

Protein sequence

MRRAFFLVFF LVLALAGCAT PRIVVLSDPL DAREHNDLGA SYETSGELDL ALKAYETAAA 
KDRSWDQPLI NLGNVHSAQA DWTQAAASYR QALKRNPENS EAMNNLAYAL VNLDEPREAL 
EWSSKAVQAE PGNPLFRATL AQALAGTGER EKALALLDET LQTLPSDDPL REKIAALRDQ 
IENSAP