Gene Dbac_0677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0677 
Symbolrho 
ID8376331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp751290 
End bp752537 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content59% 
IMG OID644999920 
Producttranscription termination factor Rho 
Protein accessionYP_003157216 
Protein GI256828488 
COG category[K] Transcription 
COG ID[COG1158] Transcription termination factor 
TIGRFAM ID[TIGR00767] transcription termination factor Rho 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000284119 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTT CTGAGTTGAA AACCAAGTCC ATGTCCGAAC TTATGGACAT TGCCGGCGAG 
TATCAGATTG AAAATATGAG CGGTCTGCGC AAGCAGGAGC TTATTTTCGC CCTGCTTCAG
GCCTGCGCTT CCCAAAACGG TTCCATTTTC GGCGAGGGCG TACTCGAAAT CCTGCCCGAC
GGCTTTGGTT TTCTGCGCTC GCCCATGTAC AGCTACATGC CGGGCCCGGA CGATATTTAC
GTCTCGCCCT CGCAGATCAG GCGTTTCGGA CTGCGCACCG GTGACGTCAT CTCCGGCCAG
ATCCGTCCGC CCAAGGAAGG GGAGCGTTAC TTCGCGCTGC TGCGGGTCAA GGAGATCTGC
TTCCGCGAAC CCGAGGAAGC CAAGCGCATT GTTCTTTTCG ACAACCTCAC CCCCATCTAT
CCCGACGAGC AGTTCCGGCT GGAAAACGGT GACAAGAACT ACTCCGCCCG CATCCTCGAC
CTCATGACCC CCATAGGCAA GGGCCAGCGC GCTCTGATTG TTGCCCCGCC GCGCACCGGC
AAGACCATGC TGATGCAGTC CATCGCCAAC TCCATCAGCG TCAACCACCC CGACGCCTAT
CTCATCGTGC TGCTGATCGA CGAGCGACCC GAGGAAGTCA CGGACATGGA GCGCACGGTC
AGGGCCGAGG TTATCAGCTC CACCTTTGAC GAACCGCCGC AGCGGCATGT GCAGGTGGCC
GAGATGGTGC TCGAAAAGGC CAAGCGCCTG GTTGAGCGCA AGGTCGACGT GGTGGTTCTG
CTTGACTCCA TCACCCGTTT GGGCCGTGCC TACAATGCGA CCACCCCTTC TTCGGGCCGG
GTTCTGTCCG GCGGTCTGGA CGCCAACGCC CTGCAGCGGC CCAAACGCTT TTTCGGCGCG
GCCCGCAACA TCGAAGAGGG CGGCAGCCTG ACCATCATCT CCACCGCCCT GGTCGATACC
GGCTCGCGCA TGGACGAGGT CATCTTCGAG GAATTCAAGG GCACGGGCAA CTCGGACATC
TATCTTGATC GTCATCTGTC CGACAAGCGC GTCTTCCCGG CCATCGATCT CAATCGTTCC
GGCACCCGCA AGGAAGAGCT GCTGCTTGCG CCCGATGTTT TGAACAAGGT TTGGATCCTG
CGCCGTATCA TGGCCTCCAT GAATTCCGTG GACAGCATGG ATTTTCTGTT GGACAAAATG
CGCGGCACCA AGAGCAACAA GGATTTTCTG GACATGATGA ATTCCTGA
 
Protein sequence
MNLSELKTKS MSELMDIAGE YQIENMSGLR KQELIFALLQ ACASQNGSIF GEGVLEILPD 
GFGFLRSPMY SYMPGPDDIY VSPSQIRRFG LRTGDVISGQ IRPPKEGERY FALLRVKEIC
FREPEEAKRI VLFDNLTPIY PDEQFRLENG DKNYSARILD LMTPIGKGQR ALIVAPPRTG
KTMLMQSIAN SISVNHPDAY LIVLLIDERP EEVTDMERTV RAEVISSTFD EPPQRHVQVA
EMVLEKAKRL VERKVDVVVL LDSITRLGRA YNATTPSSGR VLSGGLDANA LQRPKRFFGA
ARNIEEGGSL TIISTALVDT GSRMDEVIFE EFKGTGNSDI YLDRHLSDKR VFPAIDLNRS
GTRKEELLLA PDVLNKVWIL RRIMASMNSV DSMDFLLDKM RGTKSNKDFL DMMNS