Gene Dbac_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0653 
Symbol 
ID8376306 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp725933 
End bp727043 
Gene Length1111 bp 
Protein Length369 aa 
Translation table11 
GC content60% 
IMG OID644999895 
Productpeptide chain release factor 2 
Protein accessionYP_003157192 
Protein GI256828464 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAAT ATTCAGAACT TAAGGCCCAG GCCGCGCAAC TGGACGAACG CTTCACCGAC 
TTCTGGAGGC GGCTTTGACC TGCGCAGGAA CAAGGAACGC CTGAATGAGA TCGAAAAGCA 
GATCTCATCG CCCGGAGCAT GGGACAAGCC CGAACTGCTG ACCCCGGTGC TGCAGGAGAA 
GACCCAGCTT GAAAGCCGGG TCGATGAGTG GGAAGCCCTC CTGCAAGCCA GGGACAACGC 
GCTGGAATGG GTCGAGATGG CCTCCACCGA ACAGACCCAG GAGATGCTGC AGGCCCTGGA 
GGAAGCCCTG GAGGAAATGA GCGCCAAGCT CGAAGCCGCC CAGATGCGGA CCCTGCTCAG 
CGATCCGGAG GATGTGAGCG AGGCCATCCT CGAAATTCAT CCCGGCGCCG GAGGCACCGA 
GTCCCAGGAC TGGGCCGAAA TGCTGCTGCG CATGTACCGC CGGTTCGCCG AACGCGTGGG 
CTTCAAGGTC GAGCTTCTGG ACCTGCTGCC TGGCGACGAG GCGGGCATCA AGAGCGTGAC 
CCTGCACATC CACGGACCCT ATGCCTACGG CCAGCTCAAA GGCGAAAAAG GGACCCATCG 
CCTGATCCGC ATTTCGCCCT TCGACTCCAG CGGACGGCGA CACACCTCCT TCGCCTCCGT 
CGACGTATAT CCCGACGCAG GCCAGGACAT CGAAATCGAG ATCCGGGACG AGGACGTCCG 
CGTCGACATC TTCCGCTCCA GCGGACCAGG AGGACAGTCC GTGAACACGA CAGACTCGGC 
GGTGCGCGTG ACGCACATTC CCACCGGGCT GGTGGCCCAG TGCCAGAACG AAAAATCCCA 
GCACAAGAAC AAGGAGGCGG CCATGAAAGT CCTGAAAGCC CGCCTTTACG AACTCGAGCT 
GCAAAAAATC GCAAGCGAAC GGCAGGCCGA ATATGTTGCC AAGGGAGCCA TCGCGTTCGG 
TTCCCAGATC AGGACCTACA CCCTGCAGCC CTACCGTCTG GTCAAGGACC ACCGCACAGG 
CACGGACACC AGCAACGTCG ACTCGGTGCT CGACGGCAAC ATTGACGCAT TCATACACAA 
TTATCTTTTG TACCTGCATG GCAAATCATA A
 
Protein sequence
MLQYSELKAQ AAQLDERFTD FWRRLDLRRN KERLNEIEKQ ISSPGAWDKP ELLTPVLQEK 
TQLESRVDEW EALLQARDNA LEWVEMASTE QTQEMLQALE EALEEMSAKL EAAQMRTLLS 
DPEDVSEAIL EIHPGAGGTE SQDWAEMLLR MYRRFAERVG FKVELLDLLP GDEAGIKSVT 
LHIHGPYAYG QLKGEKGTHR LIRISPFDSS GRRHTSFASV DVYPDAGQDI EIEIRDEDVR 
VDIFRSSGPG GQSVNTTDSA VRVTHIPTGL VAQCQNEKSQ HKNKEAAMKV LKARLYELEL 
QKIASERQAE YVAKGAIAFG SQIRTYTLQP YRLVKDHRTG TDTSNVDSVL DGNIDAFIHN 
YLLYLHGKS