| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0635 |
|---|
| Symbol | |
|---|
| ID | 8376288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 708939 |
|---|
| End bp | 711185 |
|---|
| Gene Length | 2247 bp |
|---|
| Protein Length | 748 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644999877 |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_003157174 |
|---|
| Protein GI | 256828446 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000112896 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAAC CTTGTGATAT TCTGCGTACG GTTTTTGGTT ACGACGGGTT CGTCGGACCG
CAGGAAGCCA TTATCAAAAC CCTGCTGGCC GGTCGCGACG CCGTGGTGCT CATGCCCACC
GGCGGGGGAA AGTCCCTGTG CTACCAGATT CCGGCCCTGA TCCGGCCCGG CACCGCAGTG
GTCGTGTCGC CGCTCATCGC GCTCATGCGC GACCAGGTGC AGAGCCTGAC CCAGAACGGG
GTGCGCGCCG CCTATCTCAA CTCCTCGCTT TCGGCGGCCG AGGCCCGTAG CGTGGAGGCC
GAGCTGCTGG CCGGACGGCT GGACCTGATT TATGTCGCCC CGGAGCGACT GTTCCTGCCC
GGTTTTCTGG AACAGCTCGG GCGCATCCCG CTGGCGCTTT TCGCCATTGA CGAGGCGCAC
TGCGTGTCCC AATGGGGCCA CGATTTTCGG CCGGAGTACA CCCGCCTCGG GATGATTGCC
GAGCGTTTTC CGGATGTGCC GCGTCTGGCC CTGACCGCAA CGGCGGATGA TTTGACCCGG
GCGGACATCA TCCGGCAGCT GCGTCTGGAA TCGGCGCAGG TCTTTGCCTC GGGCTTTGAC
CGGCCGGGCA TCCGCTATCT CGTCGCCCTG AAGGATCACC CGGAGCAGCA GCTCGCGAAT
TTCCTGCGCT CGCAGTCTCC CGGCGAGGCG GGCATCGTCT ACCGCATGTC CCGCAAGAAG
GTCGAGGCCA CGGCCGCGAG CCTGTGCAAG CAGGGTTTTG CGGCCCTGCC CTATCATGCC
GGGCTGGATC CGGCCACGCG CGAGCGCAAC CAGGAGCGTT TCATGCGCGA GGACGGGGTG
ATCATGGTCG CCACCGTGGC TTTCGGCATG GGCGTGGACA AGCCCAACGT GCGTTTCGTG
GTCCATCTCG ATCCGCCCAC CAGCCTTGAG GCCTATCATC AGGAGACGGG CCGCGCCGGG
CGCGACGGTT TGCCCGCCGT GGCCCTCATG ACCTACGGCC TGGGCGACAT CGCCATGCTG
CGCCGACTGG TGGCCATGGA CGCGGGATCA TCCCGTCTCC CCGTCGATAT CGGAGAAGGG
CGCGGCGAAA GCCGGGCGCG GCACGAGCGG CTCAAGCAGC AAAAACTGAC CTCTCTCTTG
GGGTACTGCG AGACCACCAA CTGCCGGCGG CAGGTGCTGC TGCGCTATTT CGGGGAAGAC
CTGCCCCGGC CCTGCGGCAA CTGCGACATC TGCCTGAATC CCGTTGAATC CTGGGACGGG
ACGGTAGCGG CCCAGAAGGC TCTGTCCACC ATTTACCGGG TCAAGGAAGG TTTTGGCGCA
GGGCATCTGG CCGATGTGCT GGTCGGCAAG CAGACGCGGG CCGTTGAGCG CTGGAGCCAT
GAGACGGTCT CGACGTTCGG CATCGGCACG GAGCTCTCCC GGCCGGAGTG GCTGAGTGTC
TACCGCCAAC TGGTGGCTGC GGGTCTGGCC GACGTGGACA TGGAGGGGTA TGGAGCCTTG
AAGCTCAATG CCCAAAGCTG GGAAGTCATG AAGGGCGGGC GGACTGTCGC GCTGCGCCGC
GACCCGGTCC CGGTGAAGGG GGGACAAAAG TCGCCTGTGT CCAAGGTGGC GGAGGTGTCC
TCGCCCGAGG CCCGCGAACT CTGGGAAAGT CTGCGCGCAT TGCGGCTGGA GATTTCCCGC
GAACAGGGCG TGCCGCCCTA CGCGGTTTTT TCGGATCGGA CTCTTTTGGA GATGGTGCGC
TACAGGCCGC GAGGCGTCGA GGATCTGCTT GGCATCAGCG GGGTGGGGCG GATGAAGCTT
ACGGCCTATG GGGAGCGTTT TGCCGAGGTT CTGCAACGCC ATGAGTCCGA ACACGGCCGT
CCGAATGACG TGCCGGATGC TCCCGCGCCG CGCGTGCAGA AGACAACGTC CGGGGCGCAG
GTCCTGTCTG TCACGGAACA GACCAGCCTG GAGCTGTTTC GGGAAAACGG GACCGTCGAG
GCGGTGGCCG GGGCCAGGGG GCTGAAGCCT GCCACCATTT ACGGGCATCT GGTCAAGGCC
ATCGCCCAGG GACATGTCTC GGCGGCGGAG GTTACGGGGC TGACCCGCGG CCAACTCTCC
CGCATCGAGG AGAGCATCGG GTCCATGCGG CTGCGCGGCG CGGCCTCTCT TGGCGCGGTG
ATCGAGGCGC TTGACGGAGA GTTCAGCTTT GAAATCCTGC GTTGCGTCCA GGCCCAGATG
CTGCGCGAGC ACGCGGAGCA GGCATGA
|
|---|
| Protein sequence | MPKPCDILRT VFGYDGFVGP QEAIIKTLLA GRDAVVLMPT GGGKSLCYQI PALIRPGTAV
VVSPLIALMR DQVQSLTQNG VRAAYLNSSL SAAEARSVEA ELLAGRLDLI YVAPERLFLP
GFLEQLGRIP LALFAIDEAH CVSQWGHDFR PEYTRLGMIA ERFPDVPRLA LTATADDLTR
ADIIRQLRLE SAQVFASGFD RPGIRYLVAL KDHPEQQLAN FLRSQSPGEA GIVYRMSRKK
VEATAASLCK QGFAALPYHA GLDPATRERN QERFMREDGV IMVATVAFGM GVDKPNVRFV
VHLDPPTSLE AYHQETGRAG RDGLPAVALM TYGLGDIAML RRLVAMDAGS SRLPVDIGEG
RGESRARHER LKQQKLTSLL GYCETTNCRR QVLLRYFGED LPRPCGNCDI CLNPVESWDG
TVAAQKALST IYRVKEGFGA GHLADVLVGK QTRAVERWSH ETVSTFGIGT ELSRPEWLSV
YRQLVAAGLA DVDMEGYGAL KLNAQSWEVM KGGRTVALRR DPVPVKGGQK SPVSKVAEVS
SPEARELWES LRALRLEISR EQGVPPYAVF SDRTLLEMVR YRPRGVEDLL GISGVGRMKL
TAYGERFAEV LQRHESEHGR PNDVPDAPAP RVQKTTSGAQ VLSVTEQTSL ELFRENGTVE
AVAGARGLKP ATIYGHLVKA IAQGHVSAAE VTGLTRGQLS RIEESIGSMR LRGAASLGAV
IEALDGEFSF EILRCVQAQM LREHAEQA
|
|---|
| |