| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0627 |
|---|
| Symbol | |
|---|
| ID | 8376280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 699631 |
|---|
| End bp | 700779 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644999869 |
|---|
| Product | SH3 type 3 domain protein |
|---|
| Protein accession | YP_003157166 |
|---|
| Protein GI | 256828438 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.496053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCT TATTCAAAAA TACACGACTG CCGCTCCTTA TGACCCTGCT CTGCCTTCAT
TTTCTTGCCG TGCCGGTCCA GGGCGCACAG GGATTGCCCC GGGAATCGCA GCACCCTGCC
GAACAGGAAA TCAGGAAAAG GGGTTCCCGC GCGGACGGTC AGAGCCGCCC CGTCATAGAG
ACCACCAAAG ATGCCGGCGA CCATGACAGG CAAGGCCGGA AAAATAAGGA GCATTCACAG
CGCCGAAAAG AGAAAATCGA CCATCAGGGC CAGACCCGGC CCAAAGCGCC TTCCGCCGCG
CAGCGCGCTG TCAATGACAG ACCTGGCTCA CTGGGCCGGA TTCCGACATC CAAAGACCTT
GGCACGGTGA CGCCCCCGGC CGATCTCCTG CGCCTGGACC CGAAGCCGGA ACGGGCCAGG
CATGACTCTT CCGTACAGCG CCGAAACAAA GACCGCCGCG CTGATCATGT CGTGCAGCCC
CGGCAGAAAA GTTCCGTGCA CAACAGCCTT GTTTTGAACC GCGACGCAGA CAGGCATGAT
GGCCGCCGCG ATGTGAGGCG GCCGCAGGTC GATTACCGCA AGGATTACAG GACAGGCGGA
GACAGTCGCA GGCACTCGCC GCAGGTGCGC CACGACAACG GCCCGCGCCA CCGGCCCGCA
GTCGTCAAAC ACGTGATCCA CAAGATCCCT TCGCGCCATG CGGTCGTCAT GCATGGCCGG
GACAGATATC ATTATTATTC CGGCAGGTTC TACCGCCCCT GGAACAGCGG CTTCATCCTG
GTGCGCCCGC CGCTCGGGCT GGTCGTACTG AACATTCCGC TGGGCAGCCG CATGGTCCTC
TCGGCCGGCA TCACCTACCA TGTCTTCGGT GACGTCTATT ACCGCCGGGT GCCCATGGGC
TATCAGGTCG TGGAGCCGAT CCGCAGCCAC GCCGCAAACC GGCCGGACCG GGTGGAGGTC
ATCATCGACC TGCTGAACGT CCGCTACGGC CCGGAAGCAA GCGAGGAGGT CATCGCTCAG
GTCGACCGTT ACACGACCCT GCGGGTTCTT GGCAGTGCCC CCGGATGGCT CTACGTGGAA
GTGGAGGGAG ACGATCTGCG CGGATGGGTC ATGGACCGCT ATGTCAGCGC CAACAGCGCC
CAAGGCTGA
|
|---|
| Protein sequence | MNALFKNTRL PLLMTLLCLH FLAVPVQGAQ GLPRESQHPA EQEIRKRGSR ADGQSRPVIE
TTKDAGDHDR QGRKNKEHSQ RRKEKIDHQG QTRPKAPSAA QRAVNDRPGS LGRIPTSKDL
GTVTPPADLL RLDPKPERAR HDSSVQRRNK DRRADHVVQP RQKSSVHNSL VLNRDADRHD
GRRDVRRPQV DYRKDYRTGG DSRRHSPQVR HDNGPRHRPA VVKHVIHKIP SRHAVVMHGR
DRYHYYSGRF YRPWNSGFIL VRPPLGLVVL NIPLGSRMVL SAGITYHVFG DVYYRRVPMG
YQVVEPIRSH AANRPDRVEV IIDLLNVRYG PEASEEVIAQ VDRYTTLRVL GSAPGWLYVE
VEGDDLRGWV MDRYVSANSA QG
|
|---|
| |