Gene Dbac_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0624 
Symbol 
ID8376277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp695865 
End bp696797 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content61% 
IMG OID644999866 
Productperiplasmic solute binding protein 
Protein accessionYP_003157163 
Protein GI256828435 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.17894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA TTCTTTGCCT GTTCACACTG TTCTTGAGCG TGATCTCAGC CTCGGCTCAG 
GCCGGGCCGC TCGCCTTCGT GACCATCACC CCGCAAAAAT ACTTCGTCGA CAAGGTCAGC
GGCGGCGAGG TTCCCGTTTC GATCATGGTC GAGCCCGGGG CCAATCCCCA CGCTTACGAA
CCACGTCCCA GACAGATGGC CGAACTGGCC ACGGCAAGCA TCTATTTCAC CATCGGCGAC
AGCTTCGATC AGACTTGGCT TGAGCGGATC ACGAGCGCAA GCCCAGGAAT GACCGTGGTG
CACACGGCCG AGGGTATCAC CAAAATTCCC ATGAAAGAAG AACATGGCCA TGGGGAAGAG
CACGCCGGGG ACGGACACGA GGGTAAGCCG CACGATGCCT ATGAAGCCCG GAACCCTGAT
CACGACGACC GCGATCACGG CACGCTGGAC CCGCACATCT GGCTCGACCC GGCGCTGGTC
AAGATTCAGG TAGCCAGCAT CCGCGACGGC CTCTCCACTG TCGACCCTGA GCGGGCGGAC
CTCTACGCCG CCAATGCCCG CGCCTTTGAG CAGGAATTGG ACGCGCTGGA CCGGGAAATC
CGTTCCATTC TGCAGCCGCT GCCGCAGGAA AAGCGCACGT TTCTTGTCTT CCATCCTTCC
TGGGGCTATT TTGCCAAAGC CTATGGTCTG ACCCAGGCTT CCATCGAGGT GGACGGCAAG
GAGCCAAGCC CCAAGGATCT GGCGCGGATC ATCGCCGCCG GCAAGGAATC GGGGGCGCAG
GTTGTTTTTG TTCAGCCCCA GTTTTCGCAG AAAAGCGCCG CCGTCATCGC CAAACAGATC
GGAGCCAGGA TTGTTCGCCT CGACCCCCTG GCCGCGGATT GGGCCGAAAA CCTGCGCAGC
GCGGCCCGCG CCTTTGCCGA CGCCCTGGAA TAA
 
Protein sequence
MRKILCLFTL FLSVISASAQ AGPLAFVTIT PQKYFVDKVS GGEVPVSIMV EPGANPHAYE 
PRPRQMAELA TASIYFTIGD SFDQTWLERI TSASPGMTVV HTAEGITKIP MKEEHGHGEE
HAGDGHEGKP HDAYEARNPD HDDRDHGTLD PHIWLDPALV KIQVASIRDG LSTVDPERAD
LYAANARAFE QELDALDREI RSILQPLPQE KRTFLVFHPS WGYFAKAYGL TQASIEVDGK
EPSPKDLARI IAAGKESGAQ VVFVQPQFSQ KSAAVIAKQI GARIVRLDPL AADWAENLRS
AARAFADALE