| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0620 |
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| Symbol | |
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| ID | 8376273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 692148 |
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| End bp | 693545 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644999863 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_003157160 |
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| Protein GI | 256828432 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.447582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACTG CGGCACTGTT CACCCTGCTC TTCCTCTTTA TTGCCACGGG GATGCCCATC
GCCATTGCGC TGGGCCTTTC GAGCATCACC ACCATCCTGT TTTTTTCCAA CGATTCTCTG
GCATCCATTG CCCTCAAGCT GTTTGAATCG GTTTCCGAAC ACTATACCCT GCTGGCCATT
CCGTTCTTCA TTTTGTCCTC CCAGTTTTTG TCCACGGGAG GCGTGGCCAA GCGGCTTATC
AACTTCGCCC TCGACTGCAT CGGGCACGTC AAGGGCGGCC TGGCCATGGC CTCGGTCCTG
GCCTGCATGC TCTTTGCCGC CGTGTCCGGA TCTTCGCCGG CCACGGTGGC GGCCATCGGC
AGCATCGTCA TCGGCGGCAT GGTCCGTTCG GGCTACCCCG AGAGCTTCGC GGCCGGTGTC
ATCTGCAACG CCGGGACGCT GGGCATCCTC ATTCCGCCGT CCATCGTTAT GCTCGTGTAC
GCGGCGGCTA CCCAGGAATC GGCGGCACGG CTGTTCATGG CCGGTTTCAT CCCCGGCATC
TGCCTGGGGC TGCTCCTGAT GATCGCCATC TACATCGTGG CTCGCATCAA GAATTATCCG
GCCCTGGCCT GGCCCGGGTT CAAGCAGGTC TTCAAGTCCG GGTTCACGGC CATGGGCGGC
CTCATGCTGG TCGTCATCGT GCTGGGCTCC ATTTACGGCG GCATCTGCAG CCCCACGGAG
GCAGCGGCCA TTTCGGCCGT GTATGCCTAC TGGATCGCCG TCTTCGTCTA CCGCGACATG
GGGCCGCTCA AGGAAGTCCC CCTGCGCAAG GTCGACGAGC CTCTGGCTTC GGCCCTGTTT
CGCGGATTGT GGCAGACTCT CGTAGCCATC CCCAAATCCT GGTATCATCC GGAAGTGCGG
CACGTCGTGC TCGATGCGGC CAAGGTCAGC ATCATGCTGC TTTTCATCAT CGGCAACGCC
ATGCTCTTCG CCCACGTGCT GACCACGGAG CGAATCCCCC ATCTCATTGC CGAGACCATC
GTCGGCTGGG GCTTGCCGGC CTGGGGTTTT CTTATCGTCG TCAACATCCT GCTTCTGATC
GCCGGCAACT TCATGGAGCC TTCGGCCATC ACCATGATCA TGATCCCGAT CCTCTTTCCC
ATCGCGGTCA AGCTCGGCAT CGATCCCATT CATCTGGGCA TCATCTGCGT GGTCAACATG
GAGATCGGAC TGATCACCCC GCCGGTGGGG CTCAATCTCT TTGTCACGGC GGGCATCACC
AAACGCGACC TGACCTGGGT CGTGCGCGCG GCGACACCGT GGCTCATGAT TCTGCTCTTC
TTCCTGATCC TCGTCACCTA CATCCCGCAG ATATCCCTGT GGCTGCCCGA GTATATCGAC
AAGCTCAAAG GGTATTGA
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| Protein sequence | MTTAALFTLL FLFIATGMPI AIALGLSSIT TILFFSNDSL ASIALKLFES VSEHYTLLAI
PFFILSSQFL STGGVAKRLI NFALDCIGHV KGGLAMASVL ACMLFAAVSG SSPATVAAIG
SIVIGGMVRS GYPESFAAGV ICNAGTLGIL IPPSIVMLVY AAATQESAAR LFMAGFIPGI
CLGLLLMIAI YIVARIKNYP ALAWPGFKQV FKSGFTAMGG LMLVVIVLGS IYGGICSPTE
AAAISAVYAY WIAVFVYRDM GPLKEVPLRK VDEPLASALF RGLWQTLVAI PKSWYHPEVR
HVVLDAAKVS IMLLFIIGNA MLFAHVLTTE RIPHLIAETI VGWGLPAWGF LIVVNILLLI
AGNFMEPSAI TMIMIPILFP IAVKLGIDPI HLGIICVVNM EIGLITPPVG LNLFVTAGIT
KRDLTWVVRA ATPWLMILLF FLILVTYIPQ ISLWLPEYID KLKGY
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