Gene Dbac_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0611 
Symbol 
ID8376264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp682674 
End bp683789 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content59% 
IMG OID644999854 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_003157151 
Protein GI256828423 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTTGG CCATGGTTTG CGGCTTCGCC GGCATGTCTT TGGCTGCCGA CGAGACTGTG 
AAGATTGGCG TGTTTCTGCC CCTGACCGGT CAGAATGCCT TTGGCGGCCA GCTGGAATTG
GAAGGCGTGC AGATGGCCCA CAAGGAAATG GGCGAGGTTC TCGGCAAGAA GGTCGAGCTG
TTCGTAGTTG ACAACAAGTC CGACAAGGTC GAGTCCGCAA ACGCGGTCAA GCGCCTGATC
GAAAAGGAAA AAGTCCAGGC CATCATCGGC ACCTACGGTT CTTCCCTGGC CATGGCCGGT
GGTGAAGTTT CCGAAAAGGC CGGTATCCCG CAGGTCGGCA CCAGCTGCAC CAACCCGCTC
GTCACCCAGG GCAAGAAGTA CATCTTCCGC GTGTGCTTCA TCGACCCCTT CCAGGGCGCC
GGCGCAGCCA CCTATGCCTA TCGCGATCTG GGCCTGAAAA AAGCCGCTCT GCTCATCGAC
GTGGCCAACG ACTACTCCGT CGGCCTGGCC AGCTTCTTCA ACAAGTCCTT CACCAAGCTG
GGCGGCGAAA TTGTCGCCAC CCTGAACTAT CAGTCCGGCG ACCAGGATTT CACTGCCCAG
TTGCAGGAAA TCATGAGCAA GCAGCCTGAC GTTTTGTTCA TTCCCTCCTA CTTCGCCGAA
GGCGCCATCA TCATGAAGCA GGTCCAGGAA CTGGGCGGAA CCTTCAAGAT CATGGGCGGC
GACGCCATGG ACAATCCGGA GATCACCGCC ATCGGCGGCT CTGCCGTGGA AGGTTTCATG
CACACCACCT TCCCCTACGA TCCGTCCATG CCCGACATGA ACCCCGTGGC TCAGAAGTTC
ACCGACGAGT GGAAGAAGAT CAATCCCGAC AGTGACCCCA ACGTCAACGC CGCCCTGGGC
TATGACGCCT ACATGATCAT CATGGACGCC ATCACCCGCG CCGGTTCCGC CGAACCGCAG
GCCATCACCG ACGCCCTGGC CGCTACCAAG GGCTTTGTCG GCGTGACGGG CACCACGACC
ATCAACGAGA CCCACGACGC TGAAAAGCCG GTTGGCCTGG TCATGATCAA GGACGGCAAG
AAGACCTACA TCGGTGCCAT CACTCCCGAA CTCTAA
 
Protein sequence
MVLAMVCGFA GMSLAADETV KIGVFLPLTG QNAFGGQLEL EGVQMAHKEM GEVLGKKVEL 
FVVDNKSDKV ESANAVKRLI EKEKVQAIIG TYGSSLAMAG GEVSEKAGIP QVGTSCTNPL
VTQGKKYIFR VCFIDPFQGA GAATYAYRDL GLKKAALLID VANDYSVGLA SFFNKSFTKL
GGEIVATLNY QSGDQDFTAQ LQEIMSKQPD VLFIPSYFAE GAIIMKQVQE LGGTFKIMGG
DAMDNPEITA IGGSAVEGFM HTTFPYDPSM PDMNPVAQKF TDEWKKINPD SDPNVNAALG
YDAYMIIMDA ITRAGSAEPQ AITDALAATK GFVGVTGTTT INETHDAEKP VGLVMIKDGK
KTYIGAITPE L