Gene Dbac_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0580 
Symbol 
ID8376233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp654799 
End bp655467 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content63% 
IMG OID644999823 
Productendonuclease III 
Protein accessionYP_003157120 
Protein GI256828392 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.814346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTTT CATCCATCAC CGCACGAGCC CGGGCCGTTC GCGAGCGACT GGCCCGGCGG 
TATCCCAGGC CCCGGACCGA GCTTTCCTGG TCCACGCCAT GGGAGCTGCT CGTGGCCACG 
ATCCTGTCGG CCCAATGCAC GGATGCGCGT GTCAACATGG TCACACCAAA GCTCTTTGCC 
ACCTGGAGAA CCGTGGAGCA GATGGCCACG GCCGATCCCG CTCAGATCGA GAGCGTAATC 
CGCTCCACCG GGTTTTTCCG CAACAAGGCC AAAAACCTGC ACGCCTCGGC AGTGCGCATC 
GTGACCCACT TCGGCGGTCA GGTGCCGAGG ACCATGGAAG AAATGCTGAC CCTGGCCGGT 
GTGGCCCGCA AGACGGCCAA CGTGGTCCTG TCCAACGCTT ACGGCGTGCA CGCGGGCATC 
GCCGTGGACA CCCATGTCAA GCGGATCAGC TTTCGTCTCG GGTTGACCCG GCAAACCAAC 
CCGGACAAGG TCGAACAGGA TCTGCTCAAA CTTTTCCCGC AGGAAAGCTG GGGAGCGGTC 
AACCACTACC TGGTCCTTTT TGGCCGTGAG GTCTGTGCTG CCCGCAAACC CCTCTGCGAT 
GCCTGCGAAC TCGCCGACCT TTGTCCGCGG ACCGGGGTTG TTTCCCGCTC CGCTTCACCC 
GTAACGTAA
 
Protein sequence
MRVSSITARA RAVRERLARR YPRPRTELSW STPWELLVAT ILSAQCTDAR VNMVTPKLFA 
TWRTVEQMAT ADPAQIESVI RSTGFFRNKA KNLHASAVRI VTHFGGQVPR TMEEMLTLAG 
VARKTANVVL SNAYGVHAGI AVDTHVKRIS FRLGLTRQTN PDKVEQDLLK LFPQESWGAV 
NHYLVLFGRE VCAARKPLCD ACELADLCPR TGVVSRSASP VT