| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0564 |
|---|
| Symbol | |
|---|
| ID | 8376217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 639009 |
|---|
| End bp | 640271 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644999807 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003157104 |
|---|
| Protein GI | 256828376 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.242049 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGT ATTCTGCCTG GGATTGGGGC ATAGGCTCCA GAACCGTGGC CGACCTATCC
GAATGTGACT GCGACGTTGA ATGGCGCGAG GAAAACCAGG CCAGCCCAGA CGGGGAAAAG
GTGGCGGCCG TGGTCAAGAC CGGGGAAGGG GAGTTCAGCG TGTGCGTCAA CAACACATGC
TGGGAACCGA GATACGAGCG CATCTGGTAT CTGCGCTATT CTCCGGACGG GCGCCTGGCC
GGTCTGGCCT GCGACGGTGA CTGGACCTTG TGCGTGGACG GCGAGCCGTG GGAAGAGACG
TATGGATTTC TGTTCAACAC GTTGTTTTCC AAGGATGGTT CGGTCATCGC CTGTTGCGTG
GCCGATTCAA TGACCTATGG CATGGTGCTT GAGGGCGTGG CCTGGGAAAC GCTTTTTCCC
AACGCCAATA ATTTCATACT CAGTTCCGAT GGCAAGCGCA GCGCCGCTGT GGTTCAGACC
GTGCCCCTGG GGCAGGCTGA TGTGTTCAAG TTCAAGGACG GCGCTTACTC CGTCGCAGTG
GACGGAACGC CTTGGAACGT GAACTTCGTG AACGTCTGGA CCCCGCGCTT CAATGCCGAC
AACAGTTCGG TTGCGGCTCA GATTCGTCAC ACGCTCTTCG ACTACACCAT TGCCGTGGAC
GGCAAGCCCT GGGCGGAGAA CTTCAACCAG GTCTGGGAGC CGCTTTTCCA CCCTGCCAAG
AATTCGGTTG CCGCGCCGGT GCGCCTGGCC GGCAAGTGGG GCATGGCCCT GGACGGCAAG
ATCATCTGGC AGCCTTCTTT CTTTCAGGTC TGGCAGCAGC AGTTCAGCCC ATCCGGCGAC
AAGCTCGCCG CCATCGTCTG CCCCAAATAC GGGCGCTGGA CTTTGGCCGT GGACGGCACC
CCGTGGAACA CGACGTTTGG CGACATGGTC ATGGATATGA CTTTTAGCCC CGACGGAAAG
CGTCTGGCCG CACTTGGCAA GCAGGACGGC AAGTGGACCG TATTTTCCGA CGACAAGGCC
TGGAATAGCA ATTACGATAT GTGTTATGCT CCGGTTTTTT CGCCGGATAG CAACCATGTG
GCCGTCAGGG TCGAAAAGAA GGGCCGTTTC ACTATCGCGG TGGATGGCAA GGAATATGGC
CAGGGTTTCG ATCAATGCTT TGACCCGACG TTCAGTCCTG ATGGAAGCCG GATTCTCATT
CGCGCCATCG TGGATGGAAA GTACCAAAGA ATTGTCGAGT CCGTAGCAAA AATCATCGGA
TAA
|
|---|
| Protein sequence | MSEYSAWDWG IGSRTVADLS ECDCDVEWRE ENQASPDGEK VAAVVKTGEG EFSVCVNNTC
WEPRYERIWY LRYSPDGRLA GLACDGDWTL CVDGEPWEET YGFLFNTLFS KDGSVIACCV
ADSMTYGMVL EGVAWETLFP NANNFILSSD GKRSAAVVQT VPLGQADVFK FKDGAYSVAV
DGTPWNVNFV NVWTPRFNAD NSSVAAQIRH TLFDYTIAVD GKPWAENFNQ VWEPLFHPAK
NSVAAPVRLA GKWGMALDGK IIWQPSFFQV WQQQFSPSGD KLAAIVCPKY GRWTLAVDGT
PWNTTFGDMV MDMTFSPDGK RLAALGKQDG KWTVFSDDKA WNSNYDMCYA PVFSPDSNHV
AVRVEKKGRF TIAVDGKEYG QGFDQCFDPT FSPDGSRILI RAIVDGKYQR IVESVAKIIG
|
|---|
| |