| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0555 |
|---|
| Symbol | |
|---|
| ID | 8376207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 627494 |
|---|
| End bp | 629269 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644999797 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_003157095 |
|---|
| Protein GI | 256828367 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGC AAATCTGGAC TTATCTCATA GTGGGCCTGA CCTTCGCCCT CTACATAGGC
ATCGCCTGGA CGTCCCGCGT CAAGGACACC AAGGGCTTCT ACGTCGCCGG CGGCGGGGTT
CCGCCCCTGG CCAACGGCAT GGCCACTGCC GCGGACTGGA TGAGCGCGGC GTCATTCATC
TCCATGGCCG GCATGATCTC ATTCATGGGT TACGCGGGCT GCATGTACCT CATGGGCTGG
ACCGGCGGCT ACGTGCTCCT GGCCCTGCTC CTGGCCCCGT ATCTGCGCAA GTTCGGCAAA
TTCACGGTCC CGGATTTCGT CGGCGACCGT TACTATTCCT CGGCGGCCCG CCTTGTGGCT
CTGATCTGCG CCATTTTCAT CTCCCTGACA TACGTGGCCG GGCAGATGCG CGGCGTGGGC
ATCGTCTTCA GCCGCTTCCT GGAAGTCGAC GTCAACACCG GCGTCATGAT CGGCATGGTC
CTGGTCTTCC TGTATGCGGC CATCGGCGGC ATGAAAGGCA TCACCTGGAC CCAGGTGGCC
CAGTACTGCG TCCTGATCAC GGCCTTCATC ATCCCGGCCA TCGCCATTTC CCTTAAGCTG
ACCGGCAACC CCATCCCGCA GATCGGATTC GGCGGCACCA TCCTCGGAGG TCCGGATTCT
GGCAAATTCC TGCTTGAGAC GCTGAACCAG ATCGGCAGGG ACCTGGGTTT CGCCGAGTAC
ACCAGTGCCT TTGGCGCGGG CACCAAGCCC ATGATCGACG TCTTCGCCAT CACCATGTGC
CTCATGGTCG GCACGGCGGG CTTGCCCCAC GTCATCATCC GCTTTTACAC CGTGCCAAGC
GTCCGGGCTG CGCGCCTCTC AGCCTTCTAC GCCATCTTTT TCATCGCCAT CCTCTACACC
ACAGCACCGG CCCTGGGCGC CTTTTCCCGC TACACGCTGA CCAACGCCCT GAGCGAAACA
CCCTACTCCT CCGTGCCGGC CTGGTTCGGA AACTGGGAGA AAACAGGACT TCTGGCCTGG
GTCGACAAAA ACAACGACGG CATCATCACC TATCGCGGCG GTGCGGCCTT CGCAGGCAAG
CCCGCGTACA GCGGGGAAAC AGGCGCGCAC GGCCAGCGAC TGGTCACCAA CACGCCTCTC
GACAACGCCA ACGAACTCTA CATAGACAAC GACATCATGG TCCTGGCCAC GCCCGAAATC
TCCCAACTTC CGCCCTGGGT CATCGCCCTG GTCGCGGCGG GCGGACTGGC CGCGGCCCTG
TCCACGGCGG CCGGCCTCCT GCTGGTCATC GCCTCGTCCA TCTCCCATGA CCTCTACTAC
CGTATCATCA ACCGCGACGC CTCGGAGAAG ATACGCCTGC TCGTGGGCCG GGTCATGATC
GGTGTGGGCG TCGTCATCGC GGGATACTTC GGCATCAACC CTCCGGGCTT TGTGGCCCAG
GTTGTGGCAC TGGCCTTCGG ACTGGCGTCA TCCTCCTTCT TCCCCATCAT CGTGCTCGGC
ATCTTCTGGA AGCGCGCGAC CAAGGAGGGA GCCATCAGCG GCATGATCAG CGGCATCGGT
TTCACCATGC TCTACATAGT GCAGACCAAG TTCATGGGCG TGTCCCCCTG GTTCTTCGGC
ATCAGCCCCG AAGGCATCGG CACCGTGGGC ATGGTCATCA ATTTCGCGGT CACATTCGGC
GTCTCCCTGA TCACCAAGGC CCCGCCGGCC GCCGTGCAGG AAATGGTCGA GAGCGTGCGC
ATCCCGCGCG GAGCGGGTGC GGCCATAGAT CACTGA
|
|---|
| Protein sequence | MSLQIWTYLI VGLTFALYIG IAWTSRVKDT KGFYVAGGGV PPLANGMATA ADWMSAASFI
SMAGMISFMG YAGCMYLMGW TGGYVLLALL LAPYLRKFGK FTVPDFVGDR YYSSAARLVA
LICAIFISLT YVAGQMRGVG IVFSRFLEVD VNTGVMIGMV LVFLYAAIGG MKGITWTQVA
QYCVLITAFI IPAIAISLKL TGNPIPQIGF GGTILGGPDS GKFLLETLNQ IGRDLGFAEY
TSAFGAGTKP MIDVFAITMC LMVGTAGLPH VIIRFYTVPS VRAARLSAFY AIFFIAILYT
TAPALGAFSR YTLTNALSET PYSSVPAWFG NWEKTGLLAW VDKNNDGIIT YRGGAAFAGK
PAYSGETGAH GQRLVTNTPL DNANELYIDN DIMVLATPEI SQLPPWVIAL VAAGGLAAAL
STAAGLLLVI ASSISHDLYY RIINRDASEK IRLLVGRVMI GVGVVIAGYF GINPPGFVAQ
VVALAFGLAS SSFFPIIVLG IFWKRATKEG AISGMISGIG FTMLYIVQTK FMGVSPWFFG
ISPEGIGTVG MVINFAVTFG VSLITKAPPA AVQEMVESVR IPRGAGAAID H
|
|---|
| |