Gene Dbac_0545 details

Gene Information

• Locus tag: Dbac_0545
• ID: 8376197
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 618715
• End bp: 619221
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 644999787
• Product: cold-shock DNA-binding domain protein
• Protein accession: YP_003157085
• Protein GI: 256828357
• COG category: [K] Transcription
• COG ID: [COG1278] Cold shock proteins

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.803384
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGATTTC ACGGAGAGAT TTCCGAATGG AGAGATGATC GAGGTTTTGG ATTCATCACG 
CCGACGGGCG GTGGTACCAG AGTCTTTGTG CATATCAGCG CTTTGCAGAA AGGTCGGCGG 
CCGCGTGCCG GGGAAATGGT CACGTACGAA GTCGGAAACA GTGGAGACAA AGGGCCTCGC 
GCCCTGAATG TGAACTTCGT CAATGCATTA CCGGGGCGTA GAAATGAGAG CCCCCGGAGA 
TCCTTTTTTC CTGTCGTTGT TCTTGTACTG CTCATTGCGG CCGGAGCATA TGGGGCAAGA 
CGTTTTGTGC CATCCGATAT TTTTCAGGCT ATAAATATCA AGCAGCAGAG CCCACGTGCT 
CAAGCCTTCG CGTGTGAAGG GAAGATTTAT TGCTCGGAAA TGAACTCCTG CGAGGAAGCA 
CTGTTTTATC TGGACTCTTG TCCGGGGGTG CAAATCGACG GCGACGGAGA CGGCGTTCCG 
TGCGAGAAAC AATGGTGCAA TGAATGA 

 

Protein sequence

MRFHGEISEW RDDRGFGFIT PTGGGTRVFV HISALQKGRR PRAGEMVTYE VGNSGDKGPR 
ALNVNFVNAL PGRRNESPRR SFFPVVVLVL LIAAGAYGAR RFVPSDIFQA INIKQQSPRA 
QAFACEGKIY CSEMNSCEEA LFYLDSCPGV QIDGDGDGVP CEKQWCNE