Gene Dbac_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0500 
Symbol 
ID8376151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp575971 
End bp578793 
Gene Length2823 bp 
Protein Length940 aa 
Translation table11 
GC content62% 
IMG OID644999742 
Producthistidine kinase 
Protein accessionYP_003157041 
Protein GI256828313 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAACG CCATGAGTAA CCGCCTGAAC CATGTATGCG CGGCCTGTAT TCCGTGCCGG 
GCAATTTTCG TCGTGCTTGC GGGCATGCTG TTCTTTCATG TGTGGATTTC TTCGGCTTTT
GCCGGTGAAG TGTGCCTGCT GGGCGAGGAG CGCGACGAAT ACGACCTGCG GCCCTACATG
GAGTATCTGG AAGACACGGA GAAGACGCTG ACCATAAAGC AGGTGGCTTC CGCAAGAATG
GGGCCGCAAT TCGGGACGCC GCAAGGCGGA CACTTCAATT TCGGCTTCAG ACATTCGGCC
CTGTGGTTCC GGTTTACCAT ACAGGAACAG TCAGCGCCTT CTGACGGGAG CGCTTCGCCT
CGATATTGGA TTTTTGATCC GGGGTGGAAT TTATACGCCA CCATAGAGCT TTTCGTGCCC
GATCCGGACT CTCCCGACGG CTGGCGGACC TACAGTTCTG GCCACCTTCG CTCGGTTTCG
GGGGATCAGG AACGGCGGCA CTTCCGCCTC CCCAGCGGTC TGTCGGCCCC GACCACCTGC
TACCTCCGGG TCACCGGCAT AAGGGCGCTG GTCCTGAGCC CGCACATCAC GACCATCGAT
CGCGCCATCT GGATCAACGA CGTCAAGGTG CTCGGCACGG GCCTGCTGGT GGGCTTTTTT
TTCACTATGG TGCTCATCCA TCTGGCCATT TATCTGTACA CCGGAAACGG CAAGTTCAAA
TGGCTGGTTC TGGGCAACCT CGCTTTCGCC GGTTTCGTGG CGCTCACCAG CTATCAGCAT
CTCTTCAGCA TCAGAAACAT GCCGGCGGCG ATCATGATGG CCGGCCTGAT GGCGCAAGGA
TTTCTCGCCT GCGTGATCAG AGAATTTCTG GAACTCAAGA AATACAACAA GCGAATTAAT
GCGATCATGC TATTTTTCAT TTACCTGGTC TTTGCCGTGG CCGCCGGCGC TTTTTACTTG
CCGCAAGAAC TGCAAGGAAA TTTTTCATTG AACGTGGCCG TGCCCGTGTC GTTGATCGGG
GCTTGGGCCT GCATCGCCAG CATGAAGCGT GACCGCGTGG TTTCAAGCAT CTTTCTGATC
GCATGGGCCG GGGCGGTCGT ATCCATTTCC GTCTACAACC GGGCTGCCCA CGGCGCCTTT
TCCTTCGCGC ACCCGTCGAT CATCTGGGCC GGATTCGTAT GCGAGGGCGT CGCCATGTCC
ATTCTGCTGG CTTATACGGT CCAGACCATG GCCGTGCAAC GCCAGTCGGC CGAGGCCATG
GCCCAGGCCA AGAGCACGTT CCTGGCCAGC ATGAGCCACG AGATCCGCAC CCCCATGACC
GCCATCCTGG GCTTTCTGAA CCTGTCCCTG CAGATGAGGC CCGAGGGGCA GCTTCGCCAA
TACCTGCTCA AAATCCGCAC CTCGGCGCAG CATCTTATGG GCATCATCAA CGACATCCTG
GATCTGGCGA AGATAGAGGC CGACAAGATG GAATTGGATG CCGATCCGTT CGAGGTGGAG
GCCGTGCTGC GCGATACGGC CGACATCCTG GTCGCGCGGG CCTTCGAGAA CGGCAATGAA
CTGGTGGTTT CGGTGCAGCC CGGCCTCCAG CACCGCCTGG TCGGAGACTC GCTGCGCCTC
AAGCAGATTC TGGTCAACCT GGGCGGCAAC GCCATCAAAT TCACCAGGAA CGGCACCGTT
CGACTGGCCG TGCTCCGCGC GGAAGATGGG CCGTCGTCGG AAGACGCGGT CACCCTGCGA
TTCCAGGTGA GCGACACGGG CATCGGCATT GACGCGGCGG TCTTGCCCCG CCTGTTCGAA
TCCTTTGTGC AGGCCGACAC CTCCACGGCC CGCGTGTACG GAGGCACGGG CCTCGGCCTG
AACATCAGCC GCAGGCTGGT GCATCTCATG GGCGGGGAAA TAGCGGTGCG AAGCCAGCTC
GGACAGGGCT CGACCTTCCA GTTCACGGCC GTCTTCAAGA CTGAAGGCTC GGCCATGGAG
CCGGCAATGA CTGCGGACCA GGGAGGCCTG AAGGTGCTGG TCGCGGAGGA CAACCCCGCC
AGCCGTGAGG CCATGGAAGA GGTCTCGGCG TGTCTGGGCC TGAAAAGCAC GTTTGCCGGA
TCGGCGGCGC AGGCCCTCCA ACTGGCGGCT GCAGAAGATT TTGACCTGAT CCTTCTTGAT
TGGGACCTGC CGGACACGAC CGGGCCCGAG GCCGTCACGC TGCTGCGCTC GTCGCAGCGT
CTGGTCCGGG TGCCGGTGGC GCTCATGACC AGCCCGGCCC GGCCCGAAGT GGAGAGCATT
GACCCGGCAC GGCTCGGAGT CGAGGACATT CTGGCCAAGC CGTTCACGGC CTCGTCGGTG
CGGGACATGG TGCGCCGGGT CATCCATAAT GAAGACTCCC CTGCTCGCGA GATCGGAGGC
ATCGCGGCCG AGGAGCAGCG CAGCCGCGAG CGGGCACGGG GACTGCGCGT CCTGCTGGCC
GAGGACAACC GGGTCAACCA GGAGCTCATA AGCCTGATCC TGTCTCAAGC CGGGGTGCTG
GTGGAGGTCG CGGGTAACGG CATCGAGGCC GTGCTGCGCG TGATGGATAC AAGCCTCCCT
GAACCGGATG TCGTACTCAT GGACGTACAC ATGCCGGAGA TGGACGGATA CGAGGCCACG
CGGAACATCC GGCGTGACAG GCGTTTTCAG GCCCTGCCCA TCATCGCCCT GACCACCAAC
GTCATGGCCG GTGACAGGCA ACGGTGCCTT GAAGCGGGCA TGAACGACCA CCTGGGCAAG
CCCGTGGACA CGGGGGCGCT CTTTGCCGCC CTGGTCAAAT GTAAAACCGC GAACCCTTCC
TGA
 
Protein sequence
MGNAMSNRLN HVCAACIPCR AIFVVLAGML FFHVWISSAF AGEVCLLGEE RDEYDLRPYM 
EYLEDTEKTL TIKQVASARM GPQFGTPQGG HFNFGFRHSA LWFRFTIQEQ SAPSDGSASP
RYWIFDPGWN LYATIELFVP DPDSPDGWRT YSSGHLRSVS GDQERRHFRL PSGLSAPTTC
YLRVTGIRAL VLSPHITTID RAIWINDVKV LGTGLLVGFF FTMVLIHLAI YLYTGNGKFK
WLVLGNLAFA GFVALTSYQH LFSIRNMPAA IMMAGLMAQG FLACVIREFL ELKKYNKRIN
AIMLFFIYLV FAVAAGAFYL PQELQGNFSL NVAVPVSLIG AWACIASMKR DRVVSSIFLI
AWAGAVVSIS VYNRAAHGAF SFAHPSIIWA GFVCEGVAMS ILLAYTVQTM AVQRQSAEAM
AQAKSTFLAS MSHEIRTPMT AILGFLNLSL QMRPEGQLRQ YLLKIRTSAQ HLMGIINDIL
DLAKIEADKM ELDADPFEVE AVLRDTADIL VARAFENGNE LVVSVQPGLQ HRLVGDSLRL
KQILVNLGGN AIKFTRNGTV RLAVLRAEDG PSSEDAVTLR FQVSDTGIGI DAAVLPRLFE
SFVQADTSTA RVYGGTGLGL NISRRLVHLM GGEIAVRSQL GQGSTFQFTA VFKTEGSAME
PAMTADQGGL KVLVAEDNPA SREAMEEVSA CLGLKSTFAG SAAQALQLAA AEDFDLILLD
WDLPDTTGPE AVTLLRSSQR LVRVPVALMT SPARPEVESI DPARLGVEDI LAKPFTASSV
RDMVRRVIHN EDSPAREIGG IAAEEQRSRE RARGLRVLLA EDNRVNQELI SLILSQAGVL
VEVAGNGIEA VLRVMDTSLP EPDVVLMDVH MPEMDGYEAT RNIRRDRRFQ ALPIIALTTN
VMAGDRQRCL EAGMNDHLGK PVDTGALFAA LVKCKTANPS