Gene Dbac_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0468 
Symbol 
ID8376117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp540762 
End bp541904 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content61% 
IMG OID644999708 
Productprotein of unknown function DUF140 
Protein accessionYP_003157009 
Protein GI256828281 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein
[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACG ACCACTCCAC GACACCATCG CCCGCACTCT CCGTAAACTC CAGCCCGGAG 
TTGCTGGACT TAAGCCTGCG CGGAATCATA GACCTGCGCA CGACTCCGGA GATCATGGAT
CGCCTGGCGC AGCTGCCGCT ACCCCTTCCC AGGCGTATTC GCGCCGACCT GAGCGGAGTC
ACGCGCATGG ACGATTGCGG GGCGCTCGTG ATCCTGCAGC TGCGGCGCAT GGCTGAAAAA
AACGGCTGCG ATCTTAAGAT GCATGGAACC CCAGGTCACG TGCAGGAGCT CCTGGATTTT
CTGCGTTTGG ACGATCCGCC GCAATCGGTC GGCATCAAAA GAGCAAAACC CGATTTCATG
ACGCGTTTCG GCATCAAGAC CCTCGATGTG ACGAATCAGG CCGTAACCCA TGTGTCCTTC
GTGGGCGAGG TCGTCGTGAC TCTTTTGTCC CTGCTGCGCC ATCCGGACCG GCTGCGCCTG
GGCGACACGG TCCTCTACAT GCAACGGGTC GGCGTGGACG CCTTGCCCAT TGTCGGCCTG
ATCAGCTTTC TTCTGGGGCT GATCATGGCC TTCATGTCCG CCGTGCAGTT GCAGCAGTTC
GGGGCCAACA TCTACGTGGC ATCCCTGGTG GCGCTGGCCA TGGTCCGCGA ACTGGGACCG
ATCATGACCG CCATCCTCGT GGCCGGACGC TCGGGCTCTG CCTTCGCCGC CGAAATCGGA
ACCATGAAGG TCTCCGAGGA AGTGGACGCC CTGGTGACCA TGGGTTTCAA GCCGGCCATG
TTCCTGGTGG CGCCCAAGAT CATCGCCTCC GTGCTGGTGG TGCCGCTCTT GGCCATGTAT
TCCAACCTCT TCGCCATCGC CGGAGGCCTG CTCATCGGCG TGACCACGCT GGATCTGACC
GTCAACGCGT ACATGGCCCA GACCATGAAC ACGCTGAGCA TCTTCGACAT CAACTGGGGC
CTCTTCAAAA GCGCCATCTT CGCCGTGCTC ATCGCCACGG TGGGCTGCTT CAAAGGCTAT
CAGGTACGGG GCGGAGCGGC CAGCGTGGGC CAGGCGACGA CCTCGGCCGT GGTCACGGGC
ATCTTTCTGG TCATCCTGGT CGATTCGATC CTGGCCGTGA TCTTGAGGTA CTGGCGGCCA
TGA
 
Protein sequence
MNNDHSTTPS PALSVNSSPE LLDLSLRGII DLRTTPEIMD RLAQLPLPLP RRIRADLSGV 
TRMDDCGALV ILQLRRMAEK NGCDLKMHGT PGHVQELLDF LRLDDPPQSV GIKRAKPDFM
TRFGIKTLDV TNQAVTHVSF VGEVVVTLLS LLRHPDRLRL GDTVLYMQRV GVDALPIVGL
ISFLLGLIMA FMSAVQLQQF GANIYVASLV ALAMVRELGP IMTAILVAGR SGSAFAAEIG
TMKVSEEVDA LVTMGFKPAM FLVAPKIIAS VLVVPLLAMY SNLFAIAGGL LIGVTTLDLT
VNAYMAQTMN TLSIFDINWG LFKSAIFAVL IATVGCFKGY QVRGGAASVG QATTSAVVTG
IFLVILVDSI LAVILRYWRP