Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0454 |
Symbol | |
ID | 8376103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 531476 |
End bp | 532291 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644999694 |
Product | nitroreductase |
Protein accession | YP_003156995 |
Protein GI | 256828267 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00612332 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGACT TTCACATAGA CAAGGACAAG TGCATCCAGT GCGGCGAATG CGCGGCCGAC TGTCCGGCCG GCATCATCGA GATGCGGGAG TTCCCCGAAA TCACCGATGA AGGGCGCTGC TACCGCTGTC AGCACTGCTA CACCGTCTGC CCGACAGGGG CCGTGTCCAT CCTGGGACTG ACGCCCGAAG AGAGCGAACC GGCGAAAGAC CTGCCGTCCC CGGCGCAGAT GACCGACCTG ATCAAATGGC GTCGCTCCGT GCGGCGCTAC AAGGATGATA ACGTTCCCAA GGACCTCATC GACGAACTCG TCAACACCAC CTGCCACGCG CCGACCGGGG TCAACGCCCA GGGCGTCGTG TTCACGGTGG TCCGGGACAA GGCGTTTATG GACACCTTGC GCCGCGAAAC GCTGGACCGC CTCGGAGCAC TGGCCGACGC CGGAAAGCTG CCGGAAGGGC TCATCTCCCA ATACCTGGGC TTCGCCGTCC AGGCCTGGCG GACGGACGGC CGCGACGTCA TCTTCCGGGG CGCGCCGCAC ATGCTGCTGA CAAGCACGCC GCCCGGCGTG CCCTGTGCGG TGCAGGACGC GCACATCGCC CTGACCACCT TCGAACTCCT GGCCAGCTCC CATGGCCTCG GCACCCTCTG GGACGGCATG TTCATGATGG CCCTGGCCGT CTGTCCGCAG CTTCGGGAAA CCCTGCGCAT CCCGGCCGAT CACGCCATCG GTTACGCGCT GCTCTTCGGC AGGCCGGACG TCCAGTACCA CCGCCCCGTC AAAAGGGGCC CGGCCAAGGT CAATATCCTC GAATAG
|
Protein sequence | MIDFHIDKDK CIQCGECAAD CPAGIIEMRE FPEITDEGRC YRCQHCYTVC PTGAVSILGL TPEESEPAKD LPSPAQMTDL IKWRRSVRRY KDDNVPKDLI DELVNTTCHA PTGVNAQGVV FTVVRDKAFM DTLRRETLDR LGALADAGKL PEGLISQYLG FAVQAWRTDG RDVIFRGAPH MLLTSTPPGV PCAVQDAHIA LTTFELLASS HGLGTLWDGM FMMALAVCPQ LRETLRIPAD HAIGYALLFG RPDVQYHRPV KRGPAKVNIL E
|
| |