Gene Dbac_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0454 
Symbol 
ID8376103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp531476 
End bp532291 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID644999694 
Productnitroreductase 
Protein accessionYP_003156995 
Protein GI256828267 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00612332 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACT TTCACATAGA CAAGGACAAG TGCATCCAGT GCGGCGAATG CGCGGCCGAC 
TGTCCGGCCG GCATCATCGA GATGCGGGAG TTCCCCGAAA TCACCGATGA AGGGCGCTGC
TACCGCTGTC AGCACTGCTA CACCGTCTGC CCGACAGGGG CCGTGTCCAT CCTGGGACTG
ACGCCCGAAG AGAGCGAACC GGCGAAAGAC CTGCCGTCCC CGGCGCAGAT GACCGACCTG
ATCAAATGGC GTCGCTCCGT GCGGCGCTAC AAGGATGATA ACGTTCCCAA GGACCTCATC
GACGAACTCG TCAACACCAC CTGCCACGCG CCGACCGGGG TCAACGCCCA GGGCGTCGTG
TTCACGGTGG TCCGGGACAA GGCGTTTATG GACACCTTGC GCCGCGAAAC GCTGGACCGC
CTCGGAGCAC TGGCCGACGC CGGAAAGCTG CCGGAAGGGC TCATCTCCCA ATACCTGGGC
TTCGCCGTCC AGGCCTGGCG GACGGACGGC CGCGACGTCA TCTTCCGGGG CGCGCCGCAC
ATGCTGCTGA CAAGCACGCC GCCCGGCGTG CCCTGTGCGG TGCAGGACGC GCACATCGCC
CTGACCACCT TCGAACTCCT GGCCAGCTCC CATGGCCTCG GCACCCTCTG GGACGGCATG
TTCATGATGG CCCTGGCCGT CTGTCCGCAG CTTCGGGAAA CCCTGCGCAT CCCGGCCGAT
CACGCCATCG GTTACGCGCT GCTCTTCGGC AGGCCGGACG TCCAGTACCA CCGCCCCGTC
AAAAGGGGCC CGGCCAAGGT CAATATCCTC GAATAG
 
Protein sequence
MIDFHIDKDK CIQCGECAAD CPAGIIEMRE FPEITDEGRC YRCQHCYTVC PTGAVSILGL 
TPEESEPAKD LPSPAQMTDL IKWRRSVRRY KDDNVPKDLI DELVNTTCHA PTGVNAQGVV
FTVVRDKAFM DTLRRETLDR LGALADAGKL PEGLISQYLG FAVQAWRTDG RDVIFRGAPH
MLLTSTPPGV PCAVQDAHIA LTTFELLASS HGLGTLWDGM FMMALAVCPQ LRETLRIPAD
HAIGYALLFG RPDVQYHRPV KRGPAKVNIL E