Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0449 |
Symbol | |
ID | 8376098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 526866 |
End bp | 527885 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644999690 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_003156991 |
Protein GI | 256828263 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000103198 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTATAT ACGCAGGAAT CGATTTGCAT TCAAATTCAA ATTTCTTGTC TGTGGTCGAT AGTGCAGGAA AGATCATTGA AAAACGAAAA CTTGCTAACG ATGTCCAGGC AATTTTGCAT CCGCTTGCTG CCTATCGAGA GCAGGTCCAA GGAATTGCTA TCGAGTCGAC TTTTAACTGG TATTGGATCG TCGATGCTTT GATGGACGAA GGGTATCGGG TGCATTTGGC CAATCCGGCG GCCATCCAGA AGTATTCTGG GCTCAAGCAC AGCGACGACG CCAGTGATGC GGCTTGGCTG GCCGAGATGC TTCGCCTCGG CGTCCTGCCT GAAGGGTACA TCTATCCCAA AGCGGAACGC CCGATCCGAG ATTTATTGCG TAAACGCGGC CACTTGGTAC GTTTAAGAAC TTCATTGATC ACCAGTTTGA AAGGTATTGT CTCCAGAAAC AACGGGCATT CGATTTCGGT GAACAAGATC AAACAGCTTA AGACAAATCA CGTAGCACCA CTTTGCGTCG CCAATGAGGA TCTGGCGCTT TGCGGAGAAG TCAGCAAAGA CACCATCGAC TACCTGGGGC GGCAGATAAA GAAGATCGAG AAGCAGGCCG AGGAGAGAAT CGAACTGCGT CCGACGTACA AGGCCCTGCT TTCCATGCCA GGAGTAGGCG TGATTCTCGG TCTGACGATC ATGTTGGAAA CCGGTCCAAT TGATCGTTTC CCCAAGGCGG GCAATTTTAG CTCATATTGC CGGAAAGTGC CGTCCACTTG GATTAGCAAC GGTAAGCGTA AGGGGCGAGG CAACACCAAG AACGGAAACA AGTACTTGGC GTGGGCTTTC TCAGAGGTCG CAGAACTCGC AAGGCGTTAC GACGACGCAA GCCGTTCATG GTATGACCGC AAGATGGCCA GAAGCAACAG AATGGTCGCA CATAGCGCCT TGGCCCACAA ACTTGCGCGG GCCGCGTATT TCATCATGCG GGAGGGCGTG AACTTTGATC ACGAGAAATG TTTTGCATAA
|
Protein sequence | MAIYAGIDLH SNSNFLSVVD SAGKIIEKRK LANDVQAILH PLAAYREQVQ GIAIESTFNW YWIVDALMDE GYRVHLANPA AIQKYSGLKH SDDASDAAWL AEMLRLGVLP EGYIYPKAER PIRDLLRKRG HLVRLRTSLI TSLKGIVSRN NGHSISVNKI KQLKTNHVAP LCVANEDLAL CGEVSKDTID YLGRQIKKIE KQAEERIELR PTYKALLSMP GVGVILGLTI MLETGPIDRF PKAGNFSSYC RKVPSTWISN GKRKGRGNTK NGNKYLAWAF SEVAELARRY DDASRSWYDR KMARSNRMVA HSALAHKLAR AAYFIMREGV NFDHEKCFA
|
| |