Gene Dbac_0441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0441 
Symbol 
ID8376090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp519716 
End bp520462 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID644999682 
ProductRNA methyltransferase, TrmH family, group 1 
Protein accessionYP_003156983 
Protein GI256828255 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0565] rRNA methylase 
TIGRFAM ID[TIGR00050] RNA methyltransferase, TrmH family, group 1 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAGA ACATCGACGT CATCCTCTTC CGCCCCAAGT ACCCCGAGAA CATCGGCTCC 
GTGGCCAGAG CCTGCCTGAA CATGGGCTGC GGCCAGATCG TGCTGGTGGA GCCATGGAAT
TGGGACCAGG GCAAGGCCCT GCCCCTGGCC ACCCACCACG CCGGGCACCT CTTGGAGAAC
ATCCGCATCC ATGGGACCCT GGCCGAAGCT CTGGCGCCCT ATTCCTTCGC CTACGGCACC
ACGGCCAGGA CCGGGGGCTG GCGCCAGGGC ATCCAGACGC CGGAGGAGGC CGCCCCGCGC
ATCATCGAGC AGAGCAATGC CGGCGCCAAG GTCGCCATCG TCTTCGGCCC CGAGGACAAG
GGGCTGACCA ACGAGGAAAC AGACCTCTGC AACCAGCTCC TGACCATCCC CACCACCGAC
AACCTGACCT CGCTGAACCT GAGTCAGGCG GTCATGGTCG TGCTTTACGA GTGCTTCAAG
AAATCCCTGG CCAAACCCTT CAAGGTGGCG GGCCAGCCCA AGGATCGCTA CATCAGCAGC
GAGGAGCGGG AAGTCCTCTT CAACCAGCTG CGCGAAACCC TGATCGAGAT CGACTTCCTC
AACAAGGACA ACCCGGAATA CTTCATGCTG CCGCTGAAGC GTTTCTTCAA CCGCATCAAC
CCGCGCCTGA ACGAATACAA CCTGCTCATG GGCCTCTGCC GCCAGATGCG GCGGATCGTC
GGCATCGCCA AAAACAACAG ATCGTAG
 
Protein sequence
MLENIDVILF RPKYPENIGS VARACLNMGC GQIVLVEPWN WDQGKALPLA THHAGHLLEN 
IRIHGTLAEA LAPYSFAYGT TARTGGWRQG IQTPEEAAPR IIEQSNAGAK VAIVFGPEDK
GLTNEETDLC NQLLTIPTTD NLTSLNLSQA VMVVLYECFK KSLAKPFKVA GQPKDRYISS
EEREVLFNQL RETLIEIDFL NKDNPEYFML PLKRFFNRIN PRLNEYNLLM GLCRQMRRIV
GIAKNNRS