Gene Dbac_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0430 
Symbol 
ID8376079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp505254 
End bp508460 
Gene Length3207 bp 
Protein Length1068 aa 
Translation table11 
GC content58% 
IMG OID644999671 
ProductNon-specific serine/threonine protein kinase 
Protein accessionYP_003156972 
Protein GI256828244 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.218151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCACT CTGACGAAGC ACGCATCCAG CGTATCGTGC ACAATTTTTT GTCTGACAAT 
ATTCCTGAGC ACATTCGCGA CGGGGCCCAA TATCTCATTG CCGACGGCGG CATACAGAAA
ATCGATATCC GACGGGACGA AGACTCCTGG GATGTGGAAG GGCAGATCCA GGGCGACGAT
TTCCAGACCT ACTCCTCGGA ACTGGGCATC AACCTCGACC AGGGCACCAT CAATTCCTAC
TGCAACTGCC AGGATTCATT TTCCGGCATC TGCCGCCATG TCGCGGCCAC GGCCCTGGGG
CTTCTTTCCA AGCTCGACGT CAAAAGCGAA GTGGAGACGC AGCCCATCAA ATCCGAATGG
AAGCAAAGCT TCCGCTATTT CTTTTCCACC GCCCTGGAGC CGGAACCGGG CCATCATTAT
TTCATCTACC GCTTTTTTGC CGAGACCGGG CGGCTGCAGA TCGAGTTCTT TCGCGCCCGT
CAGAACAAGT CCGGACTGTC CACGGTCCAG AACCCCGTGA CCCTGGAACA GATCATCCGC
AACCCGGACT GGTGCGAAAT ATCGCCCGAA CTGCCCAAGG TCTGCGAACA GATCGGACAA
TACCTGGACT ATTACGGACA CCGGGTGGAA ATCCCGTTTG GCCTCATGAC CTGGTTCTTT
TGGGCCATCA AGAACGAATA CTACCAGCTA TGGGAAGAAT CCGAGCAACC CGTGCGCATC
GAGAGCACGC CCATGCGCCT GCAGCTGCGG CCCAAGTTCA CGGACGATGG ATTATCCTTC
GACATCATGC TCGGCCGCGA GGGCAAGGTG CCCTTCTCCA TCCTGAACCA GAACGTGTCC
TTTTACGGCC ACCTGCCCCT GTGGGTCTGT CTCAAGCACA GCTTCTACCC GGTGCAGACC
GGGCTGCGCC CGAGCCTGAT CCAGGAGCTC GTGATCTCTC CCCCGGTCAT CCCGCATGCG
GACATCTCCG AATTCCTGGA CCGCGTCTGG ACCCAGATTC CGGCTTCGGA CCTGCACGGC
CAGGAGGAAT TCCTGGAACG CATGCAGCCC ATTTTCGTGC CCGCGAACTA CAATCCCAAG
CTCTTCCTGA ACGAGGAAGG CAGCCTGCTG ACGCTCGAAG TCCAGAATAT CTATGAGACC
GAACACGGCG ACATCTCCCT GCCCGGCCCC AACCAGGACC TGCAGACCGG CAGCTACCAG
TTCGAGGGCA AATCCTTCCT CATCCGCCGC GACCAGGAGG AAGAGGAAGC GCTCTTGACC
ACCCTCATGG ACATGAACTT CCAGCCCAGA AGCAGCGCCA TGTGGTTCCT GGAACCCGAG
GAAGCCATCA CCTTCCTGCT CGATGCCTAT CCCAAGCTGG TCGAGGCCTA CCGTGTCTAC
GGCGAAAAGG ATCTGGCCCG CTACAAGGTT CGCCTGACCC CGCCGAGCGT GGTGGCCACG
GTGGAGACGC AGGAAGAGGA CAAGTGGTTC AACCTGGAAA TCAACGTCGA GTACGACGAT
ATCTCCGTAC CCATCGACAA GATCTGGAAG GCCTGGACCC AGGGCAAGCG CTATGTGCAA
TTGAAGGACG GCTCCTACAC CAGCCTGCCC GAAGCGTGGC TCGAAAAGCT CGGACACAAG
CTCATCGCCC TTGGCCTTGA TCCGGAAAAG CCGCCCAAGA AGCGTTTCGA GAATTTCGAG
GCTCCGGTCC TGGACAAGAT CCTCGAAGAC ATCCCCGAGA CCACTTCCGA TGGATTCTGG
GACACGCTGC GCGACAAGAT CAACGATTTT CAGGAAATCA AGCAGGTTGA AAAGCCAAAG
GGCGTGGACG CAACCCTGCG TCCCTACCAG CTGCAGGGCG TCAGTTACCT CAATTTCCTG
CGCGAATACC ACTTCGGCGG CATCCTGGCC GACGAGATGG GCCTGGGCAA GACCATCCAG
ACCCTGACCT TTCTGCAATA CATGAAGGAG CAGGGTCACA AGGGCCCGAA CCTCATCATC
GTGCCCACCT CGGTATTGCC CAACTGGGAG CGCGAGGCGC AGAAATTCGT GCCGGACATG
ACCCGCCTGG TCATCTATGG CGCGCGGCGA GAAAACCTTT TCAAAAAGAT CGAATCCTCG
GAACTGATCA TCACCACCTA TGCGCTCCTG CGCCGGGATC TGGACGAGCT TCTCAAATTC
GAATTCAACG CCGTCATTCT GGACGAAGCC CAGAACATCA AGAACCCGAA CACCATCACC
GCCCGAAGCG TTCGCAAGAT GCAGGCCCGC TTCCGACTCT GCCTGTCGGG CACGCCCATC
GAGAATACGC TCCTTGAGCT GTGGTCCCTG TTCGAGTTCC TCATGCCCGG GTTCCTCGGC
TCCCAGGCGT CCTTCCAGAA GGGCTTCGTC AAGCCCATCA AAGACGGCGA CGACGACAGC
CTCGGGTACC TCAAAGCCCG GGTCAAACCC TTCATCCTGC GCCGCACCAA GAACGAGGTC
GCCAAGGATC TGCCGCCCAA GATCGAGAAC ATCTACTACT CCGCCCTGCT GGACGATCAG
CGCGATCTCT ACTCCGCCCT GGCCAAGAAA CTCAAAGAGC AGGTATTGCA GGACGTGGAC
GAGAAGGGCA TCGGCCAGAG CCAGATCTCC ATCCTGGACG CGCTTTTGAA GCTGCGCCAG
ATCTGCTGCC ATCCAAGGCT GCTCAAGCTC GACATGCCAG GCTTCAACGC CAACCTGTCC
TCGGGCAAGT TCGAAGCCTT CAAGGATCTG GTCACCACCA TCATCGACGA CGGGCACAAG
GTGCTGGTCT TCTCGCAGTT CGTGCAGATG CTCCATATCA TCCGCAACTG GCTGCACATG
GTCGAGATCC CCTTCTGCTA CCTGGACGGT ACATCGAAGG ACCGCTTCGA ACAGGTCGAC
AAGTTCAACA ACACGCCCGA GATCCCCATC TTCCTGATCT CGCTCAAGGC GGGCGGCACG
GGCCTGAACC TGACTTCGGC CGACTACGTC ATCCATTACG ATCCGTGGTG GAACCCGGCC
GTGGAAGACC AGGCCACCGA CCGTACGCAC CGCATCGGCC AGACCCGCCA GGTCTTCGCC
TACAAGATGA TCTGCGAAAA CACGGTCGAG GAAAAAATCC TCAAGCTCCA GGAATCGAAA
AAAGGCATCG CCGACTCCAT CATCCCCGGT CAGTCGGCCT GGAAGAGCCT GACCCGCTCC
GATCTGGAAA TGCTCTTCGA AATCTAG
 
Protein sequence
MSHSDEARIQ RIVHNFLSDN IPEHIRDGAQ YLIADGGIQK IDIRRDEDSW DVEGQIQGDD 
FQTYSSELGI NLDQGTINSY CNCQDSFSGI CRHVAATALG LLSKLDVKSE VETQPIKSEW
KQSFRYFFST ALEPEPGHHY FIYRFFAETG RLQIEFFRAR QNKSGLSTVQ NPVTLEQIIR
NPDWCEISPE LPKVCEQIGQ YLDYYGHRVE IPFGLMTWFF WAIKNEYYQL WEESEQPVRI
ESTPMRLQLR PKFTDDGLSF DIMLGREGKV PFSILNQNVS FYGHLPLWVC LKHSFYPVQT
GLRPSLIQEL VISPPVIPHA DISEFLDRVW TQIPASDLHG QEEFLERMQP IFVPANYNPK
LFLNEEGSLL TLEVQNIYET EHGDISLPGP NQDLQTGSYQ FEGKSFLIRR DQEEEEALLT
TLMDMNFQPR SSAMWFLEPE EAITFLLDAY PKLVEAYRVY GEKDLARYKV RLTPPSVVAT
VETQEEDKWF NLEINVEYDD ISVPIDKIWK AWTQGKRYVQ LKDGSYTSLP EAWLEKLGHK
LIALGLDPEK PPKKRFENFE APVLDKILED IPETTSDGFW DTLRDKINDF QEIKQVEKPK
GVDATLRPYQ LQGVSYLNFL REYHFGGILA DEMGLGKTIQ TLTFLQYMKE QGHKGPNLII
VPTSVLPNWE REAQKFVPDM TRLVIYGARR ENLFKKIESS ELIITTYALL RRDLDELLKF
EFNAVILDEA QNIKNPNTIT ARSVRKMQAR FRLCLSGTPI ENTLLELWSL FEFLMPGFLG
SQASFQKGFV KPIKDGDDDS LGYLKARVKP FILRRTKNEV AKDLPPKIEN IYYSALLDDQ
RDLYSALAKK LKEQVLQDVD EKGIGQSQIS ILDALLKLRQ ICCHPRLLKL DMPGFNANLS
SGKFEAFKDL VTTIIDDGHK VLVFSQFVQM LHIIRNWLHM VEIPFCYLDG TSKDRFEQVD
KFNNTPEIPI FLISLKAGGT GLNLTSADYV IHYDPWWNPA VEDQATDRTH RIGQTRQVFA
YKMICENTVE EKILKLQESK KGIADSIIPG QSAWKSLTRS DLEMLFEI