Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0430 |
Symbol | |
ID | 8376079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 505254 |
End bp | 508460 |
Gene Length | 3207 bp |
Protein Length | 1068 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644999671 |
Product | Non-specific serine/threonine protein kinase |
Protein accession | YP_003156972 |
Protein GI | 256828244 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.218151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCCACT CTGACGAAGC ACGCATCCAG CGTATCGTGC ACAATTTTTT GTCTGACAAT ATTCCTGAGC ACATTCGCGA CGGGGCCCAA TATCTCATTG CCGACGGCGG CATACAGAAA ATCGATATCC GACGGGACGA AGACTCCTGG GATGTGGAAG GGCAGATCCA GGGCGACGAT TTCCAGACCT ACTCCTCGGA ACTGGGCATC AACCTCGACC AGGGCACCAT CAATTCCTAC TGCAACTGCC AGGATTCATT TTCCGGCATC TGCCGCCATG TCGCGGCCAC GGCCCTGGGG CTTCTTTCCA AGCTCGACGT CAAAAGCGAA GTGGAGACGC AGCCCATCAA ATCCGAATGG AAGCAAAGCT TCCGCTATTT CTTTTCCACC GCCCTGGAGC CGGAACCGGG CCATCATTAT TTCATCTACC GCTTTTTTGC CGAGACCGGG CGGCTGCAGA TCGAGTTCTT TCGCGCCCGT CAGAACAAGT CCGGACTGTC CACGGTCCAG AACCCCGTGA CCCTGGAACA GATCATCCGC AACCCGGACT GGTGCGAAAT ATCGCCCGAA CTGCCCAAGG TCTGCGAACA GATCGGACAA TACCTGGACT ATTACGGACA CCGGGTGGAA ATCCCGTTTG GCCTCATGAC CTGGTTCTTT TGGGCCATCA AGAACGAATA CTACCAGCTA TGGGAAGAAT CCGAGCAACC CGTGCGCATC GAGAGCACGC CCATGCGCCT GCAGCTGCGG CCCAAGTTCA CGGACGATGG ATTATCCTTC GACATCATGC TCGGCCGCGA GGGCAAGGTG CCCTTCTCCA TCCTGAACCA GAACGTGTCC TTTTACGGCC ACCTGCCCCT GTGGGTCTGT CTCAAGCACA GCTTCTACCC GGTGCAGACC GGGCTGCGCC CGAGCCTGAT CCAGGAGCTC GTGATCTCTC CCCCGGTCAT CCCGCATGCG GACATCTCCG AATTCCTGGA CCGCGTCTGG ACCCAGATTC CGGCTTCGGA CCTGCACGGC CAGGAGGAAT TCCTGGAACG CATGCAGCCC ATTTTCGTGC CCGCGAACTA CAATCCCAAG CTCTTCCTGA ACGAGGAAGG CAGCCTGCTG ACGCTCGAAG TCCAGAATAT CTATGAGACC GAACACGGCG ACATCTCCCT GCCCGGCCCC AACCAGGACC TGCAGACCGG CAGCTACCAG TTCGAGGGCA AATCCTTCCT CATCCGCCGC GACCAGGAGG AAGAGGAAGC GCTCTTGACC ACCCTCATGG ACATGAACTT CCAGCCCAGA AGCAGCGCCA TGTGGTTCCT GGAACCCGAG GAAGCCATCA CCTTCCTGCT CGATGCCTAT CCCAAGCTGG TCGAGGCCTA CCGTGTCTAC GGCGAAAAGG ATCTGGCCCG CTACAAGGTT CGCCTGACCC CGCCGAGCGT GGTGGCCACG GTGGAGACGC AGGAAGAGGA CAAGTGGTTC AACCTGGAAA TCAACGTCGA GTACGACGAT ATCTCCGTAC CCATCGACAA GATCTGGAAG GCCTGGACCC AGGGCAAGCG CTATGTGCAA TTGAAGGACG GCTCCTACAC CAGCCTGCCC GAAGCGTGGC TCGAAAAGCT CGGACACAAG CTCATCGCCC TTGGCCTTGA TCCGGAAAAG CCGCCCAAGA AGCGTTTCGA GAATTTCGAG GCTCCGGTCC TGGACAAGAT CCTCGAAGAC ATCCCCGAGA CCACTTCCGA TGGATTCTGG GACACGCTGC GCGACAAGAT CAACGATTTT CAGGAAATCA AGCAGGTTGA AAAGCCAAAG GGCGTGGACG CAACCCTGCG TCCCTACCAG CTGCAGGGCG TCAGTTACCT CAATTTCCTG CGCGAATACC ACTTCGGCGG CATCCTGGCC GACGAGATGG GCCTGGGCAA GACCATCCAG ACCCTGACCT TTCTGCAATA CATGAAGGAG CAGGGTCACA AGGGCCCGAA CCTCATCATC GTGCCCACCT CGGTATTGCC CAACTGGGAG CGCGAGGCGC AGAAATTCGT GCCGGACATG ACCCGCCTGG TCATCTATGG CGCGCGGCGA GAAAACCTTT TCAAAAAGAT CGAATCCTCG GAACTGATCA TCACCACCTA TGCGCTCCTG CGCCGGGATC TGGACGAGCT TCTCAAATTC GAATTCAACG CCGTCATTCT GGACGAAGCC CAGAACATCA AGAACCCGAA CACCATCACC GCCCGAAGCG TTCGCAAGAT GCAGGCCCGC TTCCGACTCT GCCTGTCGGG CACGCCCATC GAGAATACGC TCCTTGAGCT GTGGTCCCTG TTCGAGTTCC TCATGCCCGG GTTCCTCGGC TCCCAGGCGT CCTTCCAGAA GGGCTTCGTC AAGCCCATCA AAGACGGCGA CGACGACAGC CTCGGGTACC TCAAAGCCCG GGTCAAACCC TTCATCCTGC GCCGCACCAA GAACGAGGTC GCCAAGGATC TGCCGCCCAA GATCGAGAAC ATCTACTACT CCGCCCTGCT GGACGATCAG CGCGATCTCT ACTCCGCCCT GGCCAAGAAA CTCAAAGAGC AGGTATTGCA GGACGTGGAC GAGAAGGGCA TCGGCCAGAG CCAGATCTCC ATCCTGGACG CGCTTTTGAA GCTGCGCCAG ATCTGCTGCC ATCCAAGGCT GCTCAAGCTC GACATGCCAG GCTTCAACGC CAACCTGTCC TCGGGCAAGT TCGAAGCCTT CAAGGATCTG GTCACCACCA TCATCGACGA CGGGCACAAG GTGCTGGTCT TCTCGCAGTT CGTGCAGATG CTCCATATCA TCCGCAACTG GCTGCACATG GTCGAGATCC CCTTCTGCTA CCTGGACGGT ACATCGAAGG ACCGCTTCGA ACAGGTCGAC AAGTTCAACA ACACGCCCGA GATCCCCATC TTCCTGATCT CGCTCAAGGC GGGCGGCACG GGCCTGAACC TGACTTCGGC CGACTACGTC ATCCATTACG ATCCGTGGTG GAACCCGGCC GTGGAAGACC AGGCCACCGA CCGTACGCAC CGCATCGGCC AGACCCGCCA GGTCTTCGCC TACAAGATGA TCTGCGAAAA CACGGTCGAG GAAAAAATCC TCAAGCTCCA GGAATCGAAA AAAGGCATCG CCGACTCCAT CATCCCCGGT CAGTCGGCCT GGAAGAGCCT GACCCGCTCC GATCTGGAAA TGCTCTTCGA AATCTAG
|
Protein sequence | MSHSDEARIQ RIVHNFLSDN IPEHIRDGAQ YLIADGGIQK IDIRRDEDSW DVEGQIQGDD FQTYSSELGI NLDQGTINSY CNCQDSFSGI CRHVAATALG LLSKLDVKSE VETQPIKSEW KQSFRYFFST ALEPEPGHHY FIYRFFAETG RLQIEFFRAR QNKSGLSTVQ NPVTLEQIIR NPDWCEISPE LPKVCEQIGQ YLDYYGHRVE IPFGLMTWFF WAIKNEYYQL WEESEQPVRI ESTPMRLQLR PKFTDDGLSF DIMLGREGKV PFSILNQNVS FYGHLPLWVC LKHSFYPVQT GLRPSLIQEL VISPPVIPHA DISEFLDRVW TQIPASDLHG QEEFLERMQP IFVPANYNPK LFLNEEGSLL TLEVQNIYET EHGDISLPGP NQDLQTGSYQ FEGKSFLIRR DQEEEEALLT TLMDMNFQPR SSAMWFLEPE EAITFLLDAY PKLVEAYRVY GEKDLARYKV RLTPPSVVAT VETQEEDKWF NLEINVEYDD ISVPIDKIWK AWTQGKRYVQ LKDGSYTSLP EAWLEKLGHK LIALGLDPEK PPKKRFENFE APVLDKILED IPETTSDGFW DTLRDKINDF QEIKQVEKPK GVDATLRPYQ LQGVSYLNFL REYHFGGILA DEMGLGKTIQ TLTFLQYMKE QGHKGPNLII VPTSVLPNWE REAQKFVPDM TRLVIYGARR ENLFKKIESS ELIITTYALL RRDLDELLKF EFNAVILDEA QNIKNPNTIT ARSVRKMQAR FRLCLSGTPI ENTLLELWSL FEFLMPGFLG SQASFQKGFV KPIKDGDDDS LGYLKARVKP FILRRTKNEV AKDLPPKIEN IYYSALLDDQ RDLYSALAKK LKEQVLQDVD EKGIGQSQIS ILDALLKLRQ ICCHPRLLKL DMPGFNANLS SGKFEAFKDL VTTIIDDGHK VLVFSQFVQM LHIIRNWLHM VEIPFCYLDG TSKDRFEQVD KFNNTPEIPI FLISLKAGGT GLNLTSADYV IHYDPWWNPA VEDQATDRTH RIGQTRQVFA YKMICENTVE EKILKLQESK KGIADSIIPG QSAWKSLTRS DLEMLFEI
|
| |