| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0411 |
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| Symbol | |
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| ID | 8376060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 478666 |
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| End bp | 480774 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644999652 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003156953 |
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| Protein GI | 256828225 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.319721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATC CGCAGAGTGA AGAGCAACTT CTCTCCCAGG CCTGGAACCT GTTTGCCAAG
GATGACTATG CCGGAGTCCT GAGCATTTGC CGGAGCGGCT ATTCCCATGG CGTGCGCAGC
TACGACATGG TTCGGCTCAT GCTCGACAGC CTGAACAAGC TCGGCAAGGT CCAGGAGCAG
GCCGAGGTCA CTCTCAAGAT CCTGGGCGAA AACGATTATC CCCCCAAGGT CGCTGCCAAA
CTCTATTTCC GTGCCGGACT CATTTACCTG CATCAGGACG ACCACAAGGA AGCGCGGTCC
ATTTTTGAAA AAGTGCGCAT TCTCGATCCC GATTTTCCGG GCATCGAGCA GCGCATCAAG
GCTTTGACCC CCCGCCCCGT TACATCGAGC AGCAGCCGGT ATTCCCATCT TCTCGAAAAG
AACCTCATCA GCGCCGACCA GCTCTCGACG GTCATGTCCA TGGAAGGCAA GGATTCGGAT
GCCTTGCTGC TGAAGGAATA CAAGATCGCC AAGAAGGATC TGGGCGAGAG CCTGTCCCGG
TTTTACGGCA CCGAGTTCGT GCCCTTCTCC GCGGGCAAAG AGCCGCCTTT TGAACTGTTC
GAAAAGCGTC GCCTTGATCC GGATTTTCTC AAACGGTATG GCTGGCTTCC CTTTTCCCAG
GAAGGCAACA CCATCACCGT GCTCATGACC AATCCCTTCG ACCTTGGGCG TCTGGACGAG
ATCCGTTTCA TATACGGCAC GTCCAACGTT GAGGCCAAGG TCACTCTGGC CGGGGATATC
GAGCAGTACA TCGAGCACTT CTACAAGCAG TTCAGCTCGG GCGAGGATCT GGCCGCGGCT
TTTGACGAGG ATGTCGAGTC CGCCGACATA GTCACGGCGG GAGATGAGAC CGAGGCCGAG
GTGAGCGACC AGGACAGCGA GGTTGTGCGC ATGGTCAACG CCCTGCTGGT GGAGGCCTGG
CGCAAGAACG TGTCCGATAT CCACATCGAG CCCAACCCGC AGTCCCGCTA CTGCATGTTC
CGTTTCCGGC TGGACGGAAC CTGCTATGAA TTTCGCAAGG TTCGCCTGCC CCTGGCGCGA
CCCATCGTCT CGCGTCTGAA GATCATGGCC AGCCTGGACA TCGCCGAGCG CCGCCTGCCC
CAGGACGGCA AGATCAAGAT CAAGCTGCCC GACCGCAACA AGATCGTGGA ATACCGCATG
GCGACCATCC CCACCCTGGA GGGCATGGAG GACGTGGTGC TGCGCGTGCT GGCCTCGGGC
AAGCCCTTGC CGCTGGACAA GCTCGGCCTG CTGCCGCAGA ACAAGGCGGC CTTCGAGAAG
CTCATCTACA AGCCGTACGG GCTTATCCTC GTGGTCGGTC CCACGGGTTC GGGCAAGACC
ACGACCCTGC ATTCGGCGGT GAGCTACATC AACACTCCCG AGCGCAAGAT CTGGACTGCC
GAGGATCCGG TGGAAATCAC CCAGGAGGGG CTCAGGCAGG TTCAGGTCAA CCCCAAGATC
GGGCTGACCT TCGCCTCGGC CCTGCGCTCG TTCCTGCGAG CCGATCCGGA CGTGATCATG
ATCGGTGAGA TGCGCGACAA GGAAACAGCG CATATCGGCG TTGAATCGTC CCTGACCGGC
CATCTGGTTT TTTCGACCCT GCACACCAAC TCCGCCCCCG AAACAGTGAC CCGCCTGCTG
GACATGGATC TGGATCCGTT CAACTTCGCG GATTCGCTGC TCTGCGTTCT GGCCCAGAGG
CTGGTCAAGA CTCTGTGCCC GAGCTGCAAG AAAGCCTACA CCCCTGATGC CAAGGAACTT
GAGGAGATGG CCCTTGAGTT CGGGCAGGGC TGGGAGATCC ATGCCAAGGA ATTTCTGCAG
GGCAAGCCGA CCCTCTTCCG CAAGGTCGGG TGTGGGCAGT GCGTGGGCGG CTACAAGGGC
CGGGTGGGCG TGCATGAGCT CATGGTCAAT TCATCCGGCA TCAAGAACCA GATCAAGCAC
CGCAAGCCCA CGGAGGAGAT CCGGGCCCAG GCTGTGACCG AAGGTATGCT GAGCCTCAAG
CAGGACGGCA TGATGAAGGT CATGATGGGC CTGACCGACA TGGACCAGGT CCGGGCCGCG
AGCGGTTAG
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| Protein sequence | MDNPQSEEQL LSQAWNLFAK DDYAGVLSIC RSGYSHGVRS YDMVRLMLDS LNKLGKVQEQ
AEVTLKILGE NDYPPKVAAK LYFRAGLIYL HQDDHKEARS IFEKVRILDP DFPGIEQRIK
ALTPRPVTSS SSRYSHLLEK NLISADQLST VMSMEGKDSD ALLLKEYKIA KKDLGESLSR
FYGTEFVPFS AGKEPPFELF EKRRLDPDFL KRYGWLPFSQ EGNTITVLMT NPFDLGRLDE
IRFIYGTSNV EAKVTLAGDI EQYIEHFYKQ FSSGEDLAAA FDEDVESADI VTAGDETEAE
VSDQDSEVVR MVNALLVEAW RKNVSDIHIE PNPQSRYCMF RFRLDGTCYE FRKVRLPLAR
PIVSRLKIMA SLDIAERRLP QDGKIKIKLP DRNKIVEYRM ATIPTLEGME DVVLRVLASG
KPLPLDKLGL LPQNKAAFEK LIYKPYGLIL VVGPTGSGKT TTLHSAVSYI NTPERKIWTA
EDPVEITQEG LRQVQVNPKI GLTFASALRS FLRADPDVIM IGEMRDKETA HIGVESSLTG
HLVFSTLHTN SAPETVTRLL DMDLDPFNFA DSLLCVLAQR LVKTLCPSCK KAYTPDAKEL
EEMALEFGQG WEIHAKEFLQ GKPTLFRKVG CGQCVGGYKG RVGVHELMVN SSGIKNQIKH
RKPTEEIRAQ AVTEGMLSLK QDGMMKVMMG LTDMDQVRAA SG
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