Gene Dbac_0373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0373 
Symbol 
ID8376021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp443968 
End bp447162 
Gene Length3195 bp 
Protein Length1064 aa 
Translation table11 
GC content65% 
IMG OID644999614 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_003156916 
Protein GI256828188 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGCT TTCTCCTCCA CGCCTCCAAC CGCCTGGAAA ACCTGGCCGA ACTGCTGGCC 
GAGGTCCTGA AAACTCCGCT GGACCCCATG GAGCCTGAGA CCATTTTGGT CCAGTCCGGC
GGCATGCAGC GCTGGGTCTC CATGCAGCTG GCCCGCCGGC ACGGGGTCTG TGCCAATACC
CGCTTCCCCT TTCCCGTTGG CTTCGCCTAT GCGCTCTGCC GAGAACTGCG GGCCGACCTG
CCACGTGAAT ACCCGCTCAG TCAGGAACGC ATGCTGTGGC GCATCACGCA CCTGCTGCGC
GGGCTGCTGG ACGAGCCGGA GTTCGCGCCG CTGGCGCGTT ACGTACAGGA GGATTCGGAG
CTCAGGTCCG TGCAGTTGGC CGAGCGCATC GCCTATCATT TCGACCAGTA CCTCATCTTC
CGCCCGGAAT GGGCCGCACG CTGGGAGAAC CATGAACCGA GCGGGAATTT TCTCCTGCCC
GGTCACGTCG CCAGCGAAGC CTGGCAGGCC AGACTTTGGA GGGAACTGAT CCGGGACATG
GGCGGAGAGC ATCGCGCGGC GCTGCTGCGG CGGGCTATCG CCAGTCTGGA AAAGGGCACT
TCCCTGCCCG ATCTTCCGTC GCGCGTCTGC GTCTTCGGAA TACCGACCCT GCCGCCGGTC
TATCTGGATC TTCTGAAAGC CTTGTCCAGG CACAGCCAAG TGCATGTCTT CCTACTCAGC
CCTTGCCAAA AATACTGGGG CGATCTTCTG ACTCATCGGG AACGTCGGCG CGCCTACCGT
GCCGGAGAAC ACGCCTCCCC GGAACGACCC GAGGACGCAA TGCCGCTGGC AGGTCTCGGC
GCGGTGGGAA AAGAATTTCT GGAACTGCTG ATGGAACGGG ACGCGCTGGA AACGGGGCTG
TACGAGGAGC CAGTCGGGGA TACCATGCTC GGACAACTCC AGGCCGACCT TCTTGATCTG
GACGTTCGCG AGGAAAAGAC GGACTTCTCC GACACCTCCA TCCAGGTCCA CTGCTGCCAC
AGTCCCTTGC GCGAGATGGA GATCCTCAAA GACCTGATCC TCGACCTCCT GGCCAAAGAC
ACGTCCCTCT CGCCACAGGA CATCCTTGTC ATGAACCCGG ACATCGAGAG GTACGCTCCG
GTCATCCAGG CCGTGTTCGG GACTGCCGGC GAGGACGGCA TCCCATTCTC CATCTCCGAC
CGCAAACCCA CCAAGGCCGC CGAAACCATC CGCCTCTTTC TGGAGTTGCT TGAGTTCGGA
CAGCACCGTT TCGAAGCATC GCGCGTCTGC GCCCTGCTCG AAGCCCCGCC AGTGCGGCAA
CGACTGGGCC TGGATGCGTC CGATACGCAG CGAGTGTTGG AATGGGTGCG CGCATCGGGC
GTGCGCTGGG GGCTGGACCT GGATTTCCGC AGGAAGGCGG GCCTGGGGGA TTTCGGTCAG
AACACTTGGG AGAGCGGCCT GTCCCGCCTG TACCTCGGGT ACATGACCGG CGCGGCGGAC
CCGCTGGGCG GCATCGCCCC TCTGGCGCTG CGCGGCTCGG CCGAGCAGGA GCTGCTGGGC
CGCGTGACAG CCTGGATCGA CGAACTCGCC ACCCTGTGGT CCAGGCTGCG GGACACGCGT
ACGCCAGCCG ACTGGCAGGA CTGCCTGCTG TGGATCCTGG ATGCCTTCTT CCCCCAGGAC
CCCGCCCAGG CCGAGCACCT GCTGGCCATC CGCAAGGCCG TGACCGACCT GACCCGCGAC
ATGGGCGATT TCGAGGCCGA CGCACGAACC ATGCTCTACC TCATCCGCAA GCGCCTGGAC
GAGAGCGGCG GCGAGTCGGG CTTCCTGGCC TCGGGCCTGA CCTTCTGCGG CCTGAAACCA
ATGCGCTCCA TCCCCTTTCG GGTCATCTGC CTGACGGGCC TGACCAGCAC GGCCTTCCCA
CGCCAGGACA TACCCCTGGG CTTCGACCTC ATGGCCGCCC GCCCCCGTCC CGGCGACCGC
AGCCATCGCG AAGACGACCG CTACCTGTTC CTGGAGAGCA TCATCTCGGC CCGGGACAAC
CTCATCCTGA CCTACCCCGG CCTGTCCCAG TCCGACAACC TTGAGGCCCC ACCCTCGGTC
CTGGTCTCGG AACTGCTCGA TTTCCTGGAC AGGGGCTGCA CGGTTGATGG CCTAACGCCG
TCGGAGGCCA TTGTTTTCAA GCACAAGCTC CAGGCCTTCC ATCCTGACTA TTTCAGCGCA
GGGTCGCCCA TCTTTTCCTA TTCGGCCCAA AACCGTGACG CGGCGCAGGC GCTGTTTGCC
GAGCATCAGT CCAGGCAATT CTTCCCCGAA GCCAGTACTC TTGAAGGTGC ACATGCAGAG
CAGGAGATCG AGATCGACAT CGAAGAGCTG ACGCGCTTCC TGACCCACCC CTGCCGCCAC
CTGCTGCGCG CCCTGCGCAT CGACCCGACC GGAGGCGAGG ACGATTTTCT GGACGAGGAA
CCCCTGGCCA CGCCCACGGG CCTTGAAGCC TACGGTCCCC TGCAGGACCT TCTGCGCACG
GCCCTGGACG AGCCCGCCGC CAATCTGGAG GGGCTGCTCC TGGCCTGGCA GCTCCTGCCT
CCGGGCCAGG CCGGGACAGA CGCGAGCCGC AAGCTCTGCT CCCAAATCCG CGCCCTGGCC
GATCAGGCAC GGGCCGTCAT CGGCGACGAA AAACCCTTGC GCCTCGACCT GAAGCTGCCC
TTGGGCCGCA TCACCCTGAC GGGCCGCATC GACCTCCACG GCGACCGCTT CGTGACCTGC
CGCCCGGCCA AGACCAAAAG CTCGGACATG CTCCGCCTGT GGGTCCGCCA TCTGGCCGCC
TCGGCCACGG GCCATGCCGT CCAGTCCATG CACATCGGCA CCGATGACTG CTTCCCCGCA
CCAGAGGCCC CGAACGCCCG GAACCTCCTC GAAGGGTTAC TGCGACTCTA CACGCGGGGC
ATGCGCGCCC CCATCCATCT CTTCCCACGG ACCTCCCTGG CCTTCGCCGA GGCCCGCTTT
ACGGGCCGCA AGCCCAAGGA GCGCCCCGAG GCATTGATGC AGGCCATGCG CCAGTGGGAA
GGCGGCTACA TGGTCAGTCC CGAACGCGAC GACCCGCATC TGGCCTTCCT CTTCCGCGAC
ACCGAACCGG ACTGGGAGCG TTTCGCGGAC GTGGCCGAAG AAATTTACGG CCCCATTCTG
GGAGGTGCCG AGTGA
 
Protein sequence
MEGFLLHASN RLENLAELLA EVLKTPLDPM EPETILVQSG GMQRWVSMQL ARRHGVCANT 
RFPFPVGFAY ALCRELRADL PREYPLSQER MLWRITHLLR GLLDEPEFAP LARYVQEDSE
LRSVQLAERI AYHFDQYLIF RPEWAARWEN HEPSGNFLLP GHVASEAWQA RLWRELIRDM
GGEHRAALLR RAIASLEKGT SLPDLPSRVC VFGIPTLPPV YLDLLKALSR HSQVHVFLLS
PCQKYWGDLL THRERRRAYR AGEHASPERP EDAMPLAGLG AVGKEFLELL MERDALETGL
YEEPVGDTML GQLQADLLDL DVREEKTDFS DTSIQVHCCH SPLREMEILK DLILDLLAKD
TSLSPQDILV MNPDIERYAP VIQAVFGTAG EDGIPFSISD RKPTKAAETI RLFLELLEFG
QHRFEASRVC ALLEAPPVRQ RLGLDASDTQ RVLEWVRASG VRWGLDLDFR RKAGLGDFGQ
NTWESGLSRL YLGYMTGAAD PLGGIAPLAL RGSAEQELLG RVTAWIDELA TLWSRLRDTR
TPADWQDCLL WILDAFFPQD PAQAEHLLAI RKAVTDLTRD MGDFEADART MLYLIRKRLD
ESGGESGFLA SGLTFCGLKP MRSIPFRVIC LTGLTSTAFP RQDIPLGFDL MAARPRPGDR
SHREDDRYLF LESIISARDN LILTYPGLSQ SDNLEAPPSV LVSELLDFLD RGCTVDGLTP
SEAIVFKHKL QAFHPDYFSA GSPIFSYSAQ NRDAAQALFA EHQSRQFFPE ASTLEGAHAE
QEIEIDIEEL TRFLTHPCRH LLRALRIDPT GGEDDFLDEE PLATPTGLEA YGPLQDLLRT
ALDEPAANLE GLLLAWQLLP PGQAGTDASR KLCSQIRALA DQARAVIGDE KPLRLDLKLP
LGRITLTGRI DLHGDRFVTC RPAKTKSSDM LRLWVRHLAA SATGHAVQSM HIGTDDCFPA
PEAPNARNLL EGLLRLYTRG MRAPIHLFPR TSLAFAEARF TGRKPKERPE ALMQAMRQWE
GGYMVSPERD DPHLAFLFRD TEPDWERFAD VAEEIYGPIL GGAE