| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0372 |
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| Symbol | |
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| ID | 8376020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 440462 |
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| End bp | 443968 |
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| Gene Length | 3507 bp |
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| Protein Length | 1168 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644999613 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_003156915 |
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| Protein GI | 256828187 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0389874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCCA TGGACCTCTG CACCGCTCCC CTGGACGGCA CGACCCTCAT CGAGGCCAGC
GCCGGCACCG GCAAGACCTA CACCCTGACC GGCCTCTTCG TGCGCCTACT GCTGGAGAAG
AACCTGACCG TAGACCAGAT CCTGGTGGTT ACCTTCACGG ACGCGGCCAC CGAGGAACTG
CGCGGGCGGA TTCGCAAACG GCTGTCCGAC GTGGCCGGGG TGCTGGCCGG TGAACTGGAG
GCCGACGAAG AACTGGAATG GGATCTCCTG GCCCGTTTTG GCGGCACTGA TGCCGCCCGA
CGCCTGGAAC TCGCCCTGCG CAACTTCGAC CTGGCCCAGA TCTTCACCAT CCACGGCTTC
TGCCAGCGCA TGCTGGGACG CAACGGCTTC GAGTGCTCGG CCCTCTTCGA CACGCAGCTC
GAGCCGGACC TCTCGGACCT GCGCCGCCAA GTCTGCGTGG ATTTCTGGCG CAGTCACATC
CTGCCCCTTG GCGGTCTAAC CGGCACGGAA GTACGCAAGC AGCTGACCCC GGACCATCTC
ACGGAAATGT CCGGCCTGCC CTTCCTGGGC CAGCGCATCC GCATTGTGCC GGGCACCCTC
GCGCCGGACC CCGCGCCCCT GGACCGGGCA GTGCGGGAGG CATGCGAAAG GCTCAAAGCG
TCCTGGTCAG TCATGGAACC TGAAGTCCGA ACGCTCCTGC TGGCCCGGGC GGACAACTTC
AACGCACGCC AATTCTCGCC GCAGAAGCTG GATCAGCGTC TGAAAGCAAC GCGCGATTTC
CTTAACGACC CGAGGCTCGA TGCCAAGGAG CAGCTCAAGG CCCTCGGCGA ACTGACCTCG
ACCTACGTGC AGGGCATGAC CAAGAAGGCC TTCACCGCCC CGGAGCACCG GCTGTTCGAC
GAGATCCAGA ATATCCTGGA CCAAGTCGAG GCCTTGCGGC ACCTGCTGGG ACCCTTCGTG
GTCCATCTGC GCCATGCGTT CCTCTCGGGC GTGACGGCGC GACTGGACGA GCTCAAGCGG
CGTCGCAACG TGCTGGGTTT CGACGACCTG CTGCGGAACA TGCACGCCGC CCTGGCCAGC
CCCGAGCTGG TCGCTGCGGC GCGGACCCAG TACCGAGCGG CCCTCATCGA CGAGTTCCAG
GACACCGACG GACTGCAGTA CGACATATTC CGCACCCTCT TCGCCACCGG CGACGGGGAG
AACAGCCTGT TCCTCATCGG CGACCCCAAG CAGGCCATCT ACTCCTTCCG GGGCGCGGAC
CTGCACACTT ACCTTACCGC GGCCGACAGC TGCGAGCGAG GCATGACGCT GGGCGTCAAC
TACCGCTCCA CGCCGGAGCT CATCGCGGCC GTGAACCGCC TGTTTTTCAG ACCTGACAAT
CCACGGCCCT TCCTGGACCC GAAAATCGCC TATCAGCCTG TGAGCGCCCC GGACAAAGAG
CGGGACCGCT TCCGTGAAGA CGGACAAACA CCCGCGCCCA TGGTCCTCTG GCAGGTCAAA
AGCGCGGACA AGCCCCTGGC CAAAGGGGCG CTCGCGCCGC GTATCTGCCG GGCCGTGGCC
GCCGAGATCA GCCGCCTGCT GCGGGGCGCG GCCGAGGGGC GCATCCGCAT CGGCGACGCG
CCGCTCCTGC CCGGAGACAT CGCCGTCCTG GTCGAGACCC ACGCCCAGGG CGAGGCCATC
CACCAGGCCC TTGGCGCGCT TCGCATCCCG AGCGTTGTGA CCCACACCTC GTCGGTCTTC
GCCAGCCCCG AGGCGTCGGA GCTTCTGTCC GTGCTGCGCG GCATGGCCGA ATGCCAGCGC
CCGGCGGCCC TGCGCACGGC CCTGGCCGCG CCCATGATCG GCCTTACGGC CCCGGATCTC
GCGCTCATCG ACGAGGACGG CGAAAAACTC GAGGAGTGGT TCGAACGCTT CCTCGCCTGT
CGGGAGTTGT GGGACCGCCG GGGCGTCATG GCCGCCGTGC GCCGCCTCTT CGCAGGCCAA
GATGTGCGGA AACGCCTTGT CTCCCTGCCT GACGGAGAGA GGCGCATGAC CAACGTCCTG
CACTGTCTGG AGCTGCTCCA CAGCCGGGAA CGCGAGTCGG GCGCGGCCAT GCACGCGCTG
CTGACCTGGT TCGCCCGCCG TCTTGGCACC GAAGGCACCG AGGAGTCCCA GCTGCGACTG
GACACGGACC GCGACGCGGT CCAGATAGTG ACCATTCACA AGAGCAAGGG GCTGCAATAC
CCAGTGGTCT TCTGCCCCTT CATCTTTGGC CGGGCCAGAT GCCCCGAGGA CCGGGCACTG
GTCCACGAAG ACGGACTGCT CCTGGACCTG GGCACGGAGG AACTGCCAAG GCGGATAGGC
CAGGCCCTGT CCGAGGCGCA GGCCGAGCGC GTGCGGCTGC TGTACGTGGC CCTGACCCGC
GCCAAGTGCC GCTGCTACGC GATCTGGGGA CGCATCAACG AGGCCGAGAC CTCGGGCGCG
GCATGGTTGT TCCACGGGCA TCGCGCCGAC GAAAATAGCA CCCTGAGCTG GGAAACCGTC
GATGAGGACA TGGTCTGCGC GGACCTGCGT GTACTGGCCA ACGACGACAT CGAGGTCGCG
GAACTGCCCG ACGCCGAACC CAAGCAGGGA CCGCCGCAGT TCACCCATGC CCCTGACCTG
CGATGCCGCA ACTGGGATCG CGTCCTGGGC TCCGGCTTCG GGCTGGCGAG CTTCACCGGC
CTGACCCGCG GCATGGAGCA CGGGGCGCGG CCAGGCCTGG ACGAGGTTGA TGCGTCCGGC
CAGGCCGCGG ACGAATGGTC CATGGCGAAT TTTCCGTGCG GCGCCGCCGC CGGCTCGTGC
CTGCACAGGA TTTTCGAGCG CATCGATTTC GCGGACGAGA TCACCATCCC CGCCGCCGTG
ACCGAGGCGC TGGCCGCGTA CGGCTTCGAC CCGGCCTGGC ATCAAACTGT CCATGACATG
GTCAAACGGG TCCTGCACGC GGATCTGGGA GAAGGGTTGC AGCTGGGAGG CATCGAACAG
AAGGACAAGC TGGTCGAGAT GGAGTTCCTC TTCCCCCTGC GCCCCGTGAC CCGCGAGACC
CTGGCAGCCG TGTACCGGGA TTCGGCCGGA CTTCTGCCGC CGGACCTGCC GGAACGCATG
GGCAATCTGC GCTTCGAGCC GCGCCGTGGT TTCATGACCG GGTTCATGGA TCTGGTCGTG
CGCAGCGGCC GGAAGTTTTA TCTCCTCGAC TGGAAATCCA ACTGGCTCGG CCCCACTCCC
GGCCACTACA CCCCGGACGC CCTGCACGCG GCCATGGCCG GCAGTCACTA CTTCCTGCAG
TACCACCTCT ACTGCCTGGC CCTGAAGCGC CACCTCGCTC TGCGCAAGCC CGGGTTCGAC
TATGAAAAGG AATTCGGCGG CGTGCGGTAC GTCTTCCTGC GCGGCATAGA TCCGCAAACG
CCGGGCCAGG GTGTTCACGC GAACCGTCCA GATCCGCGCT TTCTGGATGC GCTGGACAAG
GCCCTCATCG ACACGGAGAA ACGCTGA
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| Protein sequence | MEPMDLCTAP LDGTTLIEAS AGTGKTYTLT GLFVRLLLEK NLTVDQILVV TFTDAATEEL
RGRIRKRLSD VAGVLAGELE ADEELEWDLL ARFGGTDAAR RLELALRNFD LAQIFTIHGF
CQRMLGRNGF ECSALFDTQL EPDLSDLRRQ VCVDFWRSHI LPLGGLTGTE VRKQLTPDHL
TEMSGLPFLG QRIRIVPGTL APDPAPLDRA VREACERLKA SWSVMEPEVR TLLLARADNF
NARQFSPQKL DQRLKATRDF LNDPRLDAKE QLKALGELTS TYVQGMTKKA FTAPEHRLFD
EIQNILDQVE ALRHLLGPFV VHLRHAFLSG VTARLDELKR RRNVLGFDDL LRNMHAALAS
PELVAAARTQ YRAALIDEFQ DTDGLQYDIF RTLFATGDGE NSLFLIGDPK QAIYSFRGAD
LHTYLTAADS CERGMTLGVN YRSTPELIAA VNRLFFRPDN PRPFLDPKIA YQPVSAPDKE
RDRFREDGQT PAPMVLWQVK SADKPLAKGA LAPRICRAVA AEISRLLRGA AEGRIRIGDA
PLLPGDIAVL VETHAQGEAI HQALGALRIP SVVTHTSSVF ASPEASELLS VLRGMAECQR
PAALRTALAA PMIGLTAPDL ALIDEDGEKL EEWFERFLAC RELWDRRGVM AAVRRLFAGQ
DVRKRLVSLP DGERRMTNVL HCLELLHSRE RESGAAMHAL LTWFARRLGT EGTEESQLRL
DTDRDAVQIV TIHKSKGLQY PVVFCPFIFG RARCPEDRAL VHEDGLLLDL GTEELPRRIG
QALSEAQAER VRLLYVALTR AKCRCYAIWG RINEAETSGA AWLFHGHRAD ENSTLSWETV
DEDMVCADLR VLANDDIEVA ELPDAEPKQG PPQFTHAPDL RCRNWDRVLG SGFGLASFTG
LTRGMEHGAR PGLDEVDASG QAADEWSMAN FPCGAAAGSC LHRIFERIDF ADEITIPAAV
TEALAAYGFD PAWHQTVHDM VKRVLHADLG EGLQLGGIEQ KDKLVEMEFL FPLRPVTRET
LAAVYRDSAG LLPPDLPERM GNLRFEPRRG FMTGFMDLVV RSGRKFYLLD WKSNWLGPTP
GHYTPDALHA AMAGSHYFLQ YHLYCLALKR HLALRKPGFD YEKEFGGVRY VFLRGIDPQT
PGQGVHANRP DPRFLDALDK ALIDTEKR
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