| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0333 |
|---|
| Symbol | |
|---|
| ID | 8375981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 389265 |
|---|
| End bp | 390509 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644999574 |
|---|
| Product | Glycosyltransferase 28 domain protein |
|---|
| Protein accession | YP_003156876 |
|---|
| Protein GI | 256828148 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4671] Predicted glycosyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAC TCATGTACTC ACACGATACC TATGGCTTGG GCCACATCCG GCGAACCATG
ACGTTGGCCC AGACTCTGCT GGCCAAAGGT CATCAGGTTC TCATCCTGAC CGGTTCGCCC
ATTGTGGGGC GGTTCGACAT CCCCAAGGGC ATCGATTTCG TGCGAATCCC GGGCATGATC
AAGCAGAGCA ACGAGGTCTA CGTTCCGCAT TCCATGGAGA TAGCCCCGCA ACTGATCCTG
GCCATCCGTC AAAACATCAT CCTGGCTACA GCCCAGACAT TCAGACCGGA CCTGTTTCTG
GTCGACAAGG CGCCCCTCGG CCTCAAGCTT GAGATCACGG CCACGCTGAT CTGGTTGCGT
GAAAACTCTC CGAAAACCAA GGTCGTACTG GGTTTGCGCG ACATCATGGA CACTCCGGAA
AGCACCATCC AGGAGTGGAA GGAGCGCAAG ATGTACGCAG TCTTTGAGCA ACTTTACTCC
GAAATATGGG TATATGGGAG CCAGCATATC TTCGACGCCG TCCGACAATA CGCCATGCCG
GAGAACATCG AATCGAAAAC CCATTTCACG GGATACATCC CGAGGCAGAT TCCACGATTG
AGAAACCGTC CGGGCATCCG CCGTGAACTC GGGCTCTGCA ACGGGGAAAA ATTCGTCCTC
GTCACGGCGG GCGGTGGAGG CGACGGTTTC AAGGTCATCG ATACGTATCT GTCCATGCTG
GAGGCTAGGC CGGACTGCGG TTTCAAATCC ATGATCGTCA CCGGCCCGAT GCTGAAAGCG
AACCTTTACG ATGAGCTGGC TTCCCGGGCC CGCAGACTCA AAATACGCAT CGTCAAGTTC
CACCGCAAAA TCGAGAAGAT CATGCTCGCG TCCGACTGCG TGGTCTCCAT GGGCGGATAC
AACACCATGT GCGAACTCAT CTGCGCGGCG CGCCCCATGC TTATCATCCC CCGCAGCATC
CCTCGCAGGG AGCAGCTCAT GCGGGCGCAG ATTTTCGCGG CGCAGGGTCT TCTCGAATAC
ATTCCGCAGG AGACGGTCAC GGCCGAGGAT ATGCGCGACA AACTTGTGCA CCTGCTGGAA
AACAGTTCGC AGTATGAACA GCGGCTCGCC ACGTTCCCCA TGACCGCGTT CGAAGTCATT
AATTCCCGTG TAGACAAGAT CGCCCTGCGG TCCCCCTTGG CGGTTTGTCC TGGTCACGAA
CCTCTCTGGA TGCCCGATTT TTACGGGTAT GTTCCCACGC AGTGA
|
|---|
| Protein sequence | MKILMYSHDT YGLGHIRRTM TLAQTLLAKG HQVLILTGSP IVGRFDIPKG IDFVRIPGMI
KQSNEVYVPH SMEIAPQLIL AIRQNIILAT AQTFRPDLFL VDKAPLGLKL EITATLIWLR
ENSPKTKVVL GLRDIMDTPE STIQEWKERK MYAVFEQLYS EIWVYGSQHI FDAVRQYAMP
ENIESKTHFT GYIPRQIPRL RNRPGIRREL GLCNGEKFVL VTAGGGGDGF KVIDTYLSML
EARPDCGFKS MIVTGPMLKA NLYDELASRA RRLKIRIVKF HRKIEKIMLA SDCVVSMGGY
NTMCELICAA RPMLIIPRSI PRREQLMRAQ IFAAQGLLEY IPQETVTAED MRDKLVHLLE
NSSQYEQRLA TFPMTAFEVI NSRVDKIALR SPLAVCPGHE PLWMPDFYGY VPTQ
|
|---|
| |