Gene Dbac_0253 details

Gene Information

• Locus tag: Dbac_0253
• ID: 8375894
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 297899
• End bp: 299812
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644999488
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_003156796
• Protein GI: 256828068
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0503698
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATAGTT TTTCAAAGAA TCTGGTTCTC TGGGCCGGGA TCTGCATGGT CATGATTGTT 
CTGTTCAATC TGTTCAATCA GCCGCCGGTT TCGACTAATG ACCTCAATTA TTCGGAATTT 
CTCAATAAAG TCCGCCAGGG TGAGGTATCC AGCGTCAAGA TTCAGGGTTC CCGTATCTCT 
GGAGTCCTGG TCAACGACCA GCGTTTCACC TCCTACGCTC CCGACGATCC GACCCTGGTC 
GACACGCTGG TCAAGAGCAA CGTCCAGGTC AAGGCCGAGC CGCAGGAAGA TGCCCCCTGG 
TACATGACGG TGCTCATTTC CTGGTTCCCG ATGCTGCTCC TTATCGGCGT GTGGATATTC 
TTCATGCGTC AGATGCAGGG CGGAGGCGGA AAAGCCATGT CTTTTGGCAG ATCGCGTGCC 
AAGCTGGTCA CCCAGGAAGA AACCAAGGTG ACTTTCGCGG ATGTGGCCGG CGTGGACGAA 
GCCAAGGAAG AGCTGCAGGA GATTGTCGAT TTCCTGAGCA ATCCCAAGAA GTTCACCCGC 
CTTGGCGGCC GCATCCCCAA GGGCGTGCTC CTGGTCGGCG GCCCCGGCAC AGGCAAGACC 
CTGCTGGCCA GGGCCGTGGC CGGCGAGGCC GGAGTGCCCT TTTTCTCCAT TTCCGGCTCG 
GATTTCGTGG AAATGTTCGT CGGTGTCGGC GCCGCCCGGG TGCGCGACCT GTTCATCCAG 
GGCAAGAAAA ACGCGCCCTG TCTCATCTTC ATCGATGAAA TCGACGCCGT GGGCCGTCAG 
CGTGGCGCAG GCCTCGGCGG CGGACATGAC GAGCGCGAGC AGACACTGAA CGCCATGCTT 
GTGGAGATGG ACGGATTCGA ATCAAACGAG GGCGTCATTC TCATCGCGGC CACCAACCGT 
CCCGACGTGC TTGACCCGGC CCTGCTGCGG CCCGGTCGAT TCGACCGTCA GGTCGTGGTG 
CCCAATCCGG ATTTGAGGGG CCGCAAGCGC ATCCTTGAAG TACACACCCG CAAGACCCCT 
CTGTCCAAAG AAGTCGATCT GGAAGTGCTC GCTCGCGGAA CCCCCGGCTT TTCCGGCGCG 
GATCTCGAGA ATCTGGTCAA CGAGGCGGCC CTGCATGCGG CCAAGCTGAG TCAGGATGTG 
GTCACCATGA TCGACTTTGA AGAGGCCAAG GACAAGGTCA TGATGGGCAA GGAACGGCGT 
TCCATGATTT TGAGCGACGA GGAAAAGAAG ACCACCGCCT ATCATGAGGC CGGTCACACG 
CTGGTCGCAC AGTTCCTGCC CGGCACGGAC CCCATTCACA AGGTGTCCAT CATCCCTCGC 
GGTCGTGCCC TGGGCGTGAC CATGCAGCTG CCCGTGGACG ATCGGCACAC GTATTCAAAG 
ACGTACCTGC AGAACAATCT GGCCGTGCTG TTTGGCGGCA GGGCCGCAGA AGAGTTGGTC 
TTCAATTCCA TCACCACGGG CGCCGGCAAC GACATCGAAC GTGCCACGGC CATGGCCAGG 
CGCATGGTCT GCGAATGGGG CATGAGCGAG GAGTTTGGTC CCATGGCGCT GGGCAAGAAA 
GACGATGAGG TCTTTCTGGG CCGCGACATG GCTCACATCA AGGACTACAG CGACGAGACA 
GCCAAGCTCA TCGACCTTGA GGTCAAACGG ATTCTCGGCG AGGCCTACAA TCGCGCCAAG 
ACCATCCTGC AGGACAACCA GGAGTTGCTG CATGCCCTGT CCCTGGCCCT CATCGATCGC 
GAGACCCTGA CCGGCGAGGA AGTGGGCAGG ATCATCAAGG GAGAGACCTT GGCTCCGGTC 
CAGAACGGCG TAAAGCCCGC GGCTGCGACG CAGGCCCCGG CCGCCGAGGG TGATGCCCCG 
GAAGAAGGGT TCACCCTGGA TGAGGAGAAC AGCGGCGACA AGGCAGGAGA ATAA 

 

Protein sequence

MNSFSKNLVL WAGICMVMIV LFNLFNQPPV STNDLNYSEF LNKVRQGEVS SVKIQGSRIS 
GVLVNDQRFT SYAPDDPTLV DTLVKSNVQV KAEPQEDAPW YMTVLISWFP MLLLIGVWIF 
FMRQMQGGGG KAMSFGRSRA KLVTQEETKV TFADVAGVDE AKEELQEIVD FLSNPKKFTR 
LGGRIPKGVL LVGGPGTGKT LLARAVAGEA GVPFFSISGS DFVEMFVGVG AARVRDLFIQ 
GKKNAPCLIF IDEIDAVGRQ RGAGLGGGHD EREQTLNAML VEMDGFESNE GVILIAATNR 
PDVLDPALLR PGRFDRQVVV PNPDLRGRKR ILEVHTRKTP LSKEVDLEVL ARGTPGFSGA 
DLENLVNEAA LHAAKLSQDV VTMIDFEEAK DKVMMGKERR SMILSDEEKK TTAYHEAGHT 
LVAQFLPGTD PIHKVSIIPR GRALGVTMQL PVDDRHTYSK TYLQNNLAVL FGGRAAEELV 
FNSITTGAGN DIERATAMAR RMVCEWGMSE EFGPMALGKK DDEVFLGRDM AHIKDYSDET 
AKLIDLEVKR ILGEAYNRAK TILQDNQELL HALSLALIDR ETLTGEEVGR IIKGETLAPV 
QNGVKPAAAT QAPAAEGDAP EEGFTLDEEN SGDKAGE