Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0253 |
Symbol | |
ID | 8375894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 297899 |
End bp | 299812 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644999488 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_003156796 |
Protein GI | 256828068 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0503698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATAGTT TTTCAAAGAA TCTGGTTCTC TGGGCCGGGA TCTGCATGGT CATGATTGTT CTGTTCAATC TGTTCAATCA GCCGCCGGTT TCGACTAATG ACCTCAATTA TTCGGAATTT CTCAATAAAG TCCGCCAGGG TGAGGTATCC AGCGTCAAGA TTCAGGGTTC CCGTATCTCT GGAGTCCTGG TCAACGACCA GCGTTTCACC TCCTACGCTC CCGACGATCC GACCCTGGTC GACACGCTGG TCAAGAGCAA CGTCCAGGTC AAGGCCGAGC CGCAGGAAGA TGCCCCCTGG TACATGACGG TGCTCATTTC CTGGTTCCCG ATGCTGCTCC TTATCGGCGT GTGGATATTC TTCATGCGTC AGATGCAGGG CGGAGGCGGA AAAGCCATGT CTTTTGGCAG ATCGCGTGCC AAGCTGGTCA CCCAGGAAGA AACCAAGGTG ACTTTCGCGG ATGTGGCCGG CGTGGACGAA GCCAAGGAAG AGCTGCAGGA GATTGTCGAT TTCCTGAGCA ATCCCAAGAA GTTCACCCGC CTTGGCGGCC GCATCCCCAA GGGCGTGCTC CTGGTCGGCG GCCCCGGCAC AGGCAAGACC CTGCTGGCCA GGGCCGTGGC CGGCGAGGCC GGAGTGCCCT TTTTCTCCAT TTCCGGCTCG GATTTCGTGG AAATGTTCGT CGGTGTCGGC GCCGCCCGGG TGCGCGACCT GTTCATCCAG GGCAAGAAAA ACGCGCCCTG TCTCATCTTC ATCGATGAAA TCGACGCCGT GGGCCGTCAG CGTGGCGCAG GCCTCGGCGG CGGACATGAC GAGCGCGAGC AGACACTGAA CGCCATGCTT GTGGAGATGG ACGGATTCGA ATCAAACGAG GGCGTCATTC TCATCGCGGC CACCAACCGT CCCGACGTGC TTGACCCGGC CCTGCTGCGG CCCGGTCGAT TCGACCGTCA GGTCGTGGTG CCCAATCCGG ATTTGAGGGG CCGCAAGCGC ATCCTTGAAG TACACACCCG CAAGACCCCT CTGTCCAAAG AAGTCGATCT GGAAGTGCTC GCTCGCGGAA CCCCCGGCTT TTCCGGCGCG GATCTCGAGA ATCTGGTCAA CGAGGCGGCC CTGCATGCGG CCAAGCTGAG TCAGGATGTG GTCACCATGA TCGACTTTGA AGAGGCCAAG GACAAGGTCA TGATGGGCAA GGAACGGCGT TCCATGATTT TGAGCGACGA GGAAAAGAAG ACCACCGCCT ATCATGAGGC CGGTCACACG CTGGTCGCAC AGTTCCTGCC CGGCACGGAC CCCATTCACA AGGTGTCCAT CATCCCTCGC GGTCGTGCCC TGGGCGTGAC CATGCAGCTG CCCGTGGACG ATCGGCACAC GTATTCAAAG ACGTACCTGC AGAACAATCT GGCCGTGCTG TTTGGCGGCA GGGCCGCAGA AGAGTTGGTC TTCAATTCCA TCACCACGGG CGCCGGCAAC GACATCGAAC GTGCCACGGC CATGGCCAGG CGCATGGTCT GCGAATGGGG CATGAGCGAG GAGTTTGGTC CCATGGCGCT GGGCAAGAAA GACGATGAGG TCTTTCTGGG CCGCGACATG GCTCACATCA AGGACTACAG CGACGAGACA GCCAAGCTCA TCGACCTTGA GGTCAAACGG ATTCTCGGCG AGGCCTACAA TCGCGCCAAG ACCATCCTGC AGGACAACCA GGAGTTGCTG CATGCCCTGT CCCTGGCCCT CATCGATCGC GAGACCCTGA CCGGCGAGGA AGTGGGCAGG ATCATCAAGG GAGAGACCTT GGCTCCGGTC CAGAACGGCG TAAAGCCCGC GGCTGCGACG CAGGCCCCGG CCGCCGAGGG TGATGCCCCG GAAGAAGGGT TCACCCTGGA TGAGGAGAAC AGCGGCGACA AGGCAGGAGA ATAA
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Protein sequence | MNSFSKNLVL WAGICMVMIV LFNLFNQPPV STNDLNYSEF LNKVRQGEVS SVKIQGSRIS GVLVNDQRFT SYAPDDPTLV DTLVKSNVQV KAEPQEDAPW YMTVLISWFP MLLLIGVWIF FMRQMQGGGG KAMSFGRSRA KLVTQEETKV TFADVAGVDE AKEELQEIVD FLSNPKKFTR LGGRIPKGVL LVGGPGTGKT LLARAVAGEA GVPFFSISGS DFVEMFVGVG AARVRDLFIQ GKKNAPCLIF IDEIDAVGRQ RGAGLGGGHD EREQTLNAML VEMDGFESNE GVILIAATNR PDVLDPALLR PGRFDRQVVV PNPDLRGRKR ILEVHTRKTP LSKEVDLEVL ARGTPGFSGA DLENLVNEAA LHAAKLSQDV VTMIDFEEAK DKVMMGKERR SMILSDEEKK TTAYHEAGHT LVAQFLPGTD PIHKVSIIPR GRALGVTMQL PVDDRHTYSK TYLQNNLAVL FGGRAAEELV FNSITTGAGN DIERATAMAR RMVCEWGMSE EFGPMALGKK DDEVFLGRDM AHIKDYSDET AKLIDLEVKR ILGEAYNRAK TILQDNQELL HALSLALIDR ETLTGEEVGR IIKGETLAPV QNGVKPAAAT QAPAAEGDAP EEGFTLDEEN SGDKAGE
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