Gene Dbac_0225 details

Gene Information

• Locus tag: Dbac_0225
• ID: 8375861
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: -
• Start bp: 266559
• End bp: 267080
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644999455
• Product: intracellular protease, PfpI family
• Protein accession: YP_003156768
• Protein GI: 256828040
• COG category: [R] General function prediction only
• COG ID: [COG0693] Putative intracellular protease/amidase
• TIGRFAM ID: [TIGR01382] intracellular protease, PfpI family

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTAA AAGACCAGAA AGTCCTGATG TTTGTGGATG ACATCTATGA AGACATGGAA 
CTTCTCTACC CATACTACCG CCTGATCGAA GAAGGCGCCG AAGTGGTCGT CGCCGGGCCT 
CAGGCGGGAG TCGTCTACAC CGGCAAAAAC GGGTATCCCT TCAAATCCAC TGCCGCCATA 
GCGGATCAGC AGGCGAGGGA CTTCGACCTG CTGGTCATTG CCGGCGGGTT CGCCCCCGAC 
AAACTCAGAC GTGACCCCAA GGTCCTGGAA CTCACTCGCG AAATGCACGA AGCCGGGAAA 
ATAGTCGCCC ACATCTGCCA CGGCGGATGG ATTCCGATCT CCGCAGGGAT CATGAAAGGC 
TTCACCTGCA CATCCACCCC CGGCATCAAG GACGACCTGG CCAACGCGGG CGCTACGTGG 
GTGGATAAGG AAGTTGTCGT GGACCGGAAT CAGATATCCG CACGAAAGCC TGATGATCTG 
CCTGCATTTT GCCGCGCCAT CATAGCACAG GCCGCGAAAT AG 

 

Protein sequence

MKLKDQKVLM FVDDIYEDME LLYPYYRLIE EGAEVVVAGP QAGVVYTGKN GYPFKSTAAI 
ADQQARDFDL LVIAGGFAPD KLRRDPKVLE LTREMHEAGK IVAHICHGGW IPISAGIMKG 
FTCTSTPGIK DDLANAGATW VDKEVVVDRN QISARKPDDL PAFCRAIIAQ AAK