Gene Dbac_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0221 
Symbol 
ID8375857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp262179 
End bp263036 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content60% 
IMG OID644999451 
ProductIntegrase catalytic region 
Protein accessionYP_003156764 
Protein GI256828036 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTAGGCG CACCCGCCCG ACGCCTCCAG GTGGCATACG CCAGGAGTCG CGGACTTTCA 
CAACGCAGGG CGTGTGCGCT GTTATCCACT TCCCGGTCGT CGCTCCACCA CTACGAGTCA
CGGCTGGAGG CCCGGGACAA GCCACTGATG GCGGCTATGA CAGATCTGGC TGCGACGTAT
CCGCGCTTTG GATATCGCCG GATCAACGTG TTCATGGAGC GTCTGGGGCA TGTCATGGGC
GCCGACAAGG CGTTCCGCCT GTGGTCCAAG GCCGGGTTGC AGGTGCCCAG GAAGCGGCCT
CGGAAACGAG TGGCGGCGTC CCGCCCGAGA CCGCAACTGC CGATGGGAGC AAACGAACTG
TGGGCGTACG ACTTTGTCTA TGACGCCTGC GCCAATGGTC AGCAGATCAA ATGCCTGACT
GTGGTAGACG AATACACGCG GGAATGCCTG GCTATAGACG TTGCCGGCAG CATCAGATCG
GGCCGGGTGA TCGAGGTGCT GTCCCGCCTG ATCAGCGAAC GTGGAGCCCC TCTGAGCCTG
CGTTCTGACA ACGGACCGGA GTTCGTGTCG AAGGCGCTGC TCAGATGGGC GGCTCAGGAG
TCTCTGGATC TGGCGCTGAT TGAGCCTGGG AAGCCATGGC AGAACGGTTT GAACGAGAGT
TTTAACGGCA AATTTCGCGA TGAGTGTCTG TCGATGGAAT GGTTCCGGTG TCGGTCCGAG
GCGCGGGTTG TGATCGAGGA ATGGAGGCGG CACTACAACT CCATTCGTCC GCATTCAAGC
CTGAACAACA TGACGCCAGA GCATTTCTGT CGGCAGTATG GGAAAAACCT GAACCGTGGG
GAAACTCTCA AGAATTGA
 
Protein sequence
MVGAPARRLQ VAYARSRGLS QRRACALLST SRSSLHHYES RLEARDKPLM AAMTDLAATY 
PRFGYRRINV FMERLGHVMG ADKAFRLWSK AGLQVPRKRP RKRVAASRPR PQLPMGANEL
WAYDFVYDAC ANGQQIKCLT VVDEYTRECL AIDVAGSIRS GRVIEVLSRL ISERGAPLSL
RSDNGPEFVS KALLRWAAQE SLDLALIEPG KPWQNGLNES FNGKFRDECL SMEWFRCRSE
ARVVIEEWRR HYNSIRPHSS LNNMTPEHFC RQYGKNLNRG ETLKN