Gene Dbac_0214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0214 
Symbol 
ID8375850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp252286 
End bp254259 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content60% 
IMG OID644999444 
Producthistidine kinase 
Protein accessionYP_003156757 
Protein GI256828029 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTTC CGTTTTTCTC TTCAATCCGT GCGACCCTCA TCTTTCTGGT ACTTTTGGCT 
ATGTTGCCGG CTCTGGGGAT CATGCTTTTT TCGGGCTACA CGCTTCGGGA GAACATGGTG
GACAGCGCCG AAGCGGCGGC CCTGCGGCAG ATCCAGGTCA TGGCTTCGCA CCACGCAAAG
GTTATTGAAA ATGCCCGCTT GCTGTTGGCC ACCCTGTCCA AGGCGCGCGA GATACAGGTG
CTCGATCCTG AGGGTTCTCA ACTTCTGCTG GAGGAAATGC TCTCCCGCAA TGGAGACTAC
GCCGCCTTGG CCCTGTCCGA TACCGACGGC CGTATCGTGG CTGTGTCTCC GGTGGCCTCC
TTTTCCTCCA TCGCAAGCGA GACCTGTTTT CAGGAAGCCA GGCAGGGCGT ACGGTTTGCC
ATGGGGAAAT ATCATCTGCA TCAGGATACC CGAAGCGTGG TCATGGATTT CGCCCAGCCG
GTCACGGATC GGGAGGGTAC GCTGCGCGGA GTGCTGGTGG CCTCTTTTGA TCTGATCTAC
TTCGGGCGGA TTTTTGCCGA AGCTCATCTG CCGGAGGGCT CGGTGTTTAC CCTGACCGAC
GCCGAAGGCA TCCGTCTGAC CCGGTTTCCG GAAACCGAGA AATACACATG GGTTCCGGAT
CTGCCCCATA TGATAGAGAA GATGTCGGCA GACGCGGAGG AAGGCGCTTT TCTGGACAAA
GGCGTTGACG GGGTGCGGCG GCTCTACGGT TTCAAACGCC TGCAGTTCGA GGACGCCCAT
TCGCCGCCGC TCATGATCCG TCTTGGGCAG CCCGAAGACC TGGCCCTGGC CGAGGCGAGG
AGGGCGCTTG TGCGCAATCT CGTGCTGCTT GTGCTCGCGA CGGCCCTGGC CATAGGCACG
GCTCACTTTG TAGGAGAACT GACCATCATG CGTCGTCTGG ATCGGCTCAT GTTCGCCGTG
GATAGCCTGG GTACAGGCGA CCTGGACACG CGCACGGGCC TCGATCACGA CGAGGGGGAG
CTTGGCGTCC TCGCGGCGGC GTTTGATCGC ATGGCGGAAA GCCTGCAAAT TCAGGATTAC
GATCGGCGAC GGGCCGAGGA AGAGGTCTGC ATACTCAACG AGGATCTGGA GGACCGGGTC
GAGCAGCGAA CGTCCGAATT GGCCAAGGCC AACGAAAATT TGCAGACGGC CCTGGAGAGC
CTGCGTCAGG CCCAGGGACA GCTGGTCATG TCCGAGAAGC TCGCGGCCCT GGGCGGGCTT
GTGGCGGGTG TGGCCCACGA AATAAACACG CCTGTGGGCG TTGCCCTTTC CGCCACGTCC
ACCATGGCCG AAAAGAACCG GATCTTGAGC GAACTGTTCG CCACGGGAGA GATGAAACGC
TCAAACCTGA CCGAATATCT GGAGTCCACC CGCGAAGGCG TGGAGATGAG TCTCCTCAAT
CTGAACCGTG CCTCGGATCT GATCCGCAGT TTCAAAATGG TCGCGGCGGA CCAGGTCTCC
GAATCGCGGC GCAGCTTCAA CGTGCGGGAA TATATCGGGC AGGTGCTCCT GAGCCTGCGG
CCAAAGCTCA AGAAGACGCC GCATCGCGTC GAGGTGGAGT GCGACGAGGA TCTGGTCATC
GAGAGTTATC CCGGGGCGCT TTCCCAGATC TTGACCAACT TCATAGTCAA CTCCCTGACT
CATGCCTTCG GCGAGGGGCA GGCCGGTCTG ATCCGCATTG TGGTCGCCAG GAATGACGGC
ACGCTGAGCC TGACCTATTC CGACGACGGA TGCGGCATCG CCCCGGAAGT GCAGGACAGG
ATCTTCGAAC CCTTTTTCAC CACGGCTCGG GCCAAAGGCT CCACCGGTCT TGGCCTGCAT
ATCGTCTTCA ATATCGTGAC CGGAACCCTG GGCGGAACCA TCACCTGTTG CAGTGCCCCG
GGCCAGGGCA CTACGTTTCA GGTGCGCATG CCCGTGGAAA GAGAGAGCGC ATGA
 
Protein sequence
MRLPFFSSIR ATLIFLVLLA MLPALGIMLF SGYTLRENMV DSAEAAALRQ IQVMASHHAK 
VIENARLLLA TLSKAREIQV LDPEGSQLLL EEMLSRNGDY AALALSDTDG RIVAVSPVAS
FSSIASETCF QEARQGVRFA MGKYHLHQDT RSVVMDFAQP VTDREGTLRG VLVASFDLIY
FGRIFAEAHL PEGSVFTLTD AEGIRLTRFP ETEKYTWVPD LPHMIEKMSA DAEEGAFLDK
GVDGVRRLYG FKRLQFEDAH SPPLMIRLGQ PEDLALAEAR RALVRNLVLL VLATALAIGT
AHFVGELTIM RRLDRLMFAV DSLGTGDLDT RTGLDHDEGE LGVLAAAFDR MAESLQIQDY
DRRRAEEEVC ILNEDLEDRV EQRTSELAKA NENLQTALES LRQAQGQLVM SEKLAALGGL
VAGVAHEINT PVGVALSATS TMAEKNRILS ELFATGEMKR SNLTEYLEST REGVEMSLLN
LNRASDLIRS FKMVAADQVS ESRRSFNVRE YIGQVLLSLR PKLKKTPHRV EVECDEDLVI
ESYPGALSQI LTNFIVNSLT HAFGEGQAGL IRIVVARNDG TLSLTYSDDG CGIAPEVQDR
IFEPFFTTAR AKGSTGLGLH IVFNIVTGTL GGTITCCSAP GQGTTFQVRM PVERESA