Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0197 |
Symbol | |
ID | 8375832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 230286 |
End bp | 232460 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644999426 |
Product | helicase, RecD/TraA family |
Protein accession | YP_003156740 |
Protein GI | 256828012 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.959927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCAGCA TACAGGGCGA AGTCATTACC GTCGTCTACC ACAATCCCGA TAACGGGTAC GTCATCGCGC GGCTGGATTC GCCGTCCGAG CCCGGCCAGG TCAACGTGGT CGGGCTGCTG GGCGATGTGG CTCCGGGTGA ATCCCTGCGC CTGACCGGCG AGTGGGTCGA GCATCCCAAG TTCGGACGGC AGTTCAAGGC CGAGTCCTGC GAGCATCTTC TGCCTGCGTC CATAAACGGC ATCCGCCGCT TTCTGGGCTC CGGCGCGGTC AAGGGCATCG GCGAGAAAAC CGCCGACCGC CTGATCAGCC GCTTCGGCAG CCAGATTCTC GACATCATGG ATTCGGACCC CGAGCAGCTG CTGGAAGTGG AGGGCATCGG CCCGGCCAAA TTGAAGACCA TAGTCTCGTC CTGGCAGGAG AAGCGGGAAG TGCGCGGGCT GATGCTCTTT TTGCAGACCC ACGGCGTAGC CACGACCTTC GCCCACCGCA TCTTCCGTCA TTACGGGGTC AACGCCGTGC AGCGCCTGCG GGCCAATCCC TATGATCTGG CCTACGACAT CCATGGCATC GGGTTCCGCA CCGCCGACGA GGTGGCCTTG AAGCTCGGCT TTGCCGAGGA CGCGCCCCAG CGTCTGGAGG CCGGGGTGGA ATACTGCCTG CGCCAGACGG CGGATGGGGC GGGGCACATG TTCCTGCCGC GTCCCACGCT GGCGGAGGAG GCGGCCAAGC TGCTGGGCTG CCATGACCTG GAGCTGATCG AGGAGCAGAT CGACGCCCTG GCCGAGCGCA AGCGTCTGGT GATCGAGCCC TTGCCGGAAA AGGGCGTGGC CGAGGCCGTT TTTCTGACCT ATTTCTACCG CACCGAGCGC GAGATCGCGT CGCGCCTGCA GGGCCTCCTG GATCATGTCA GCCGCCTCGA CCCGCAGAAG ATATCAAAAG CCGTGGAGCG TGAGGAGCAG CGCCAGTCCC TGACCCTGTC GGAAGAGCAG CGCGCGGCGG TGGAGTCGGC CTGCGGGCAC AAGGTGTCCA TCATCACCGG CGGGCCGGGC ACGGGCAAGA CGACCATCAC CCGTGTCGTG GTGCGGGCCT TGAAAGCCCT GGGGCTGAAG ATTTCCCTGG CCGCGCCCAC GGGCCGGGCC GCCAAAAGGC TGGCCGAGGC CACCGGGTTC ACGGCCACGA CCCTGCACCG CCTGCTGCGT TATCAGCCGG CCACTGGGTT CGAGTTCAAC GAGGAGAAGA AACTCTCCGC CGACGTCATG GTCGTGGACG AGGTTTCCAT GCTCGACTGC GGTCTGTGCC TGTCGCTCCT GCGCGCCCTG CCCCTGACCT GCCGCCTGGT TTTCGTCGGC GATGAGAATC AGCTGCCGTC GGTGGGCGCG GGCAACGTGC TCGGGGACAT GATCGAAAGC GGCGTGGTCC CGGCCGTGCG CCTGACGCAC ATCTACCGCC AGGCGCGGGA GAGCATGATC GTGGTCAACG CCCACCGCAT CAACGAGGGC GAGTTTCCCC TCGGCAGCCC GGAGGCTCCG CCCAAGGCCG ATTTCTTTTG GGTCGAGAAA GAGAATCTCA TTGAACTGCA GGCCCTGGTC CTGCGCATGG TCTGCGAGCG CATCCCCGAA GCGTACGGCC TTGATCCCAT GACCGACGTG CAGGTGCTCA CCCCCATGCA CAAGGGCGAG GTCGGTACCG TGGCCCTGAA CCGCCTGCTG CAGGAACGCC TCAATCCGGA TGGCCGGGAA CTGGTGCGCG GCCAGCGTGC CTATCGGGTC GGGGACCGCA TTCTGCAACT CAGGAACAAC TACGACAAGG AAGTCTTCAA CGGCGACCTT GGCCGCATCC TGGCCATCGA CACCGAAGAC GAGACCTTGC ATGCGGAATT CGATGGCCGG GAGGTGGAGT ACGGGTTCGA CGAACTCGAC GAGATCGGTC TGGCCTACGC CATCAGCGTG CACAAGAGCC AGGGCAGCGA GTATCCGGCC GTGGTCATGC CGGTGGTCTC GCAGCACTAC ATGCTCCTGC AGAGAAATCT CATCTACACC GGATTGACCA GAGCCAGGAA GCTGGCCGTG CTCATGGGCT CGCGCCGCGC CATGCACATG GGCCTGGGCA ACGAGCGCGG GCGGCAACGC CATACGTCTC TGGCCGTGCG CCTGGCAAAA GAGGGTCAAA TCTAG
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Protein sequence | MCSIQGEVIT VVYHNPDNGY VIARLDSPSE PGQVNVVGLL GDVAPGESLR LTGEWVEHPK FGRQFKAESC EHLLPASING IRRFLGSGAV KGIGEKTADR LISRFGSQIL DIMDSDPEQL LEVEGIGPAK LKTIVSSWQE KREVRGLMLF LQTHGVATTF AHRIFRHYGV NAVQRLRANP YDLAYDIHGI GFRTADEVAL KLGFAEDAPQ RLEAGVEYCL RQTADGAGHM FLPRPTLAEE AAKLLGCHDL ELIEEQIDAL AERKRLVIEP LPEKGVAEAV FLTYFYRTER EIASRLQGLL DHVSRLDPQK ISKAVEREEQ RQSLTLSEEQ RAAVESACGH KVSIITGGPG TGKTTITRVV VRALKALGLK ISLAAPTGRA AKRLAEATGF TATTLHRLLR YQPATGFEFN EEKKLSADVM VVDEVSMLDC GLCLSLLRAL PLTCRLVFVG DENQLPSVGA GNVLGDMIES GVVPAVRLTH IYRQARESMI VVNAHRINEG EFPLGSPEAP PKADFFWVEK ENLIELQALV LRMVCERIPE AYGLDPMTDV QVLTPMHKGE VGTVALNRLL QERLNPDGRE LVRGQRAYRV GDRILQLRNN YDKEVFNGDL GRILAIDTED ETLHAEFDGR EVEYGFDELD EIGLAYAISV HKSQGSEYPA VVMPVVSQHY MLLQRNLIYT GLTRARKLAV LMGSRRAMHM GLGNERGRQR HTSLAVRLAK EGQI
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