Gene Dbac_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0181 
Symbol 
ID8375815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp210471 
End bp212984 
Gene Length2514 bp 
Protein Length837 aa 
Translation table11 
GC content61% 
IMG OID644999409 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_003156724 
Protein GI256827996 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.415169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGAA ATACCGGACC GGCAAGAGAC AAGACATCAG TGTTGATCGA CAGCCTTCCC 
GGAATGGCCT TTCGCCGCCA CAACGACGCG GAACTGGGCA TGGACTTCAT CTCGCAAGGT
TGCCAGGGCC TCACGGGATA CAGCGCGGAG GAGTTGCTTA GCGGCGGACG GCTCTCGTTC
AATGATCTCG TCCTGCCCGA ATACATGCCT GAAATCCGGA AAAGCTGGAA AGAAGGCATA
AAAAATCACG CCCAGGTGCA GCTCGAATTC GAGATCATGA CCGCCGACGG ACAGCCCAAA
TGGGTCTGGG AAGTGGGCGT GCCCGTGCCG TCCTGCAACG GCGAGATAAC AACTCTTGAA
GGGCTGATTA TCGACATCAC GCCGCGCAAG CTCGCGGAAA AAAATTCCCT CTTGCGGGAA
AAGGCCCTGG AGCTAGCGGC CACCACATCT CTTGAGCTTC TCCTCGAACC CGACCTGGAG
CAGTCCATGG CCAGGATCCT GGCACGCCTG GGTCAGGGTA CGGACACGGA CCGCGTGTAC
GTTTTCAGAA ACCACCCCGA GACGGATTCC GGCACGGTGC TGACCAGCCA GATCTACGAA
TGGACGCGGG ACGGAATTCC GACCCAGATC GACAATCCAG ACCTCCAAAA CCTGCCCATG
AACGACGTGA CCCCCCGCTG GTTGGCGGAG TTGCGCGCCG GACGCTCCAT CAAGGGGCTG
GTCCGCGATT TCCCCGCGGA TGAAAAAGAA ATCCTCGAAC CACAAGGCAT CATCAGCATC
CTGGTGGTGC CCATCCAGTT GCACGGCACG TTGTGGGGAT TTCTCGGCTT TGACTCGGTG
CGCGATCCCC GCTCCTGGAC GCCCATCGAG GAGCATGTCC TGAACATCGT CTCGGCCAGC
CTGGGCGCGG CCATCGCCCG CCGTCAGGCC CAGGAGGAGC TTGCGGGCAG CAACCGGACG
CTCTTGACCA TCCTCGACAG CCTGCCCGTG GATGTCTACG TGGCCGACCT CAAAAACTAT
CGCATCCTCT TCATGAACCA GTATATGAAA GACAGCTTTG GACGCGACTG TACCGGGGAG
CTCTGCCACA CAGCGTTCAA CCACGAATCC GCGCCCTGCG GCCACTGCAC GAACAGCAGC
TTGCTTGACG AAACGGGCCG CCCCAAAGGA GTCATCGCCT GGGAATGCTT CAATCCCGTA
ACCCGCAAAT GGTACAGGAA CTTCGACCAG GTCATCCCCT GGACCGACGG ACGCCTCGTG
CGCATCGAAA TTTCCATGGA CCTGAGCGAC CGCAAGCGGG CCGAAGAGGA AATCCTGCGG
GCCAGGGATC TGGCCGAAGC CGCGAACTGC GCCAAGTCCG AATTTCTGGC CAACATGAGC
CACGAAATCC GCACGCCGCT GAACGGCGTC ATGGGCATGC TTCAACTCCT GCAGCTCACG
AAACTTGATC CAGTGCAGGA AGACTACACG GACACGGCGA TCCAGTCCTG CAACCGGCTG
GTCCGGCTCC TGACCGACAT TCTGGACCTC TCGCGCATCG AAGCGGGCAA GCTCAGCATC
CAGAGCGCGC CCATGGAGCT GTCCGAAGTG CTGCGCCAGA CCGGGGACCT CTTCTCGCCC
ACCGCCAGGG AAAAAGGCCT GAAGCTCCGC TTTGACGTGG ACCCGGCCAT CCCCAGTCAA
ATCCTCGGAG ACGCGACGCG GCTGCAGCAG GTCCTCAGCA ACATGGTCGG CAATTCCCTC
AAGTTCACCC ACTCGGGCGG CGTAACCGTC GACGCCTCTC TGCTGCCCTC CGTGCACGGC
GGGCAGTGCC GCGTGCTCTT TTCCGTCGCC GACACCGGCA TCGGCATCCC CGACGACAAG
CTGGGCAACC TTTTCCAGCC CTTCTCCCAG GTTACGGAAG GCTTCACCCG CAGCTATCAG
GGCGCAGGTC TTGGCCTGTC CATCTGCAAA CGCCTGGTGA GCTTCATGGG CGGCAACATC
TCCGTTGTCA GCGAGCTTGA GGTGGGCACA ACCATGTATT TCAGCGTCAC CTTCGGCGCC
GCCGCACCGA ACACCGCGTC CACGCCTGCC CGCGAATCCT TTTTTGCTCC CGCTCTGGAC
GGTTTGAACG TGCTCATGGC CGAAGACGAC CATTTCAGCG GCATTCTGGG CGTGAAGCTC
CTTGGCGCTT TCGGGGCCTC GGTCAGGCAT GTGCAGAACG GACGGCAGGC ACTTGAGGCC
CTTAGGAGCG AACCCTTCGA TCTTGTGCTC ATGGACGTGC AGATGCCGGT CATGGACGGC
GTCGAGGCCA CGGTGCGCAT CCGTCATGGC GATGCCGGAG ACTGCGCGAG AAACATCCCC
ATCATCGCCA TGACCTCCTA CGCCATGGAC GGCGACCGGG AAAAATTTCT GAAAGCGGGC
ATGAACGCCT ATGTGTCCAA ACCTGTCGAT ATCAAGGAAC TGATGAGCGC CATTTCGGAA
ATGCTGCACC GGGAAAGCGC GAAAAGGTCG GACACGGCGA AAGGCAGGCA TTGA
 
Protein sequence
MAGNTGPARD KTSVLIDSLP GMAFRRHNDA ELGMDFISQG CQGLTGYSAE ELLSGGRLSF 
NDLVLPEYMP EIRKSWKEGI KNHAQVQLEF EIMTADGQPK WVWEVGVPVP SCNGEITTLE
GLIIDITPRK LAEKNSLLRE KALELAATTS LELLLEPDLE QSMARILARL GQGTDTDRVY
VFRNHPETDS GTVLTSQIYE WTRDGIPTQI DNPDLQNLPM NDVTPRWLAE LRAGRSIKGL
VRDFPADEKE ILEPQGIISI LVVPIQLHGT LWGFLGFDSV RDPRSWTPIE EHVLNIVSAS
LGAAIARRQA QEELAGSNRT LLTILDSLPV DVYVADLKNY RILFMNQYMK DSFGRDCTGE
LCHTAFNHES APCGHCTNSS LLDETGRPKG VIAWECFNPV TRKWYRNFDQ VIPWTDGRLV
RIEISMDLSD RKRAEEEILR ARDLAEAANC AKSEFLANMS HEIRTPLNGV MGMLQLLQLT
KLDPVQEDYT DTAIQSCNRL VRLLTDILDL SRIEAGKLSI QSAPMELSEV LRQTGDLFSP
TAREKGLKLR FDVDPAIPSQ ILGDATRLQQ VLSNMVGNSL KFTHSGGVTV DASLLPSVHG
GQCRVLFSVA DTGIGIPDDK LGNLFQPFSQ VTEGFTRSYQ GAGLGLSICK RLVSFMGGNI
SVVSELEVGT TMYFSVTFGA AAPNTASTPA RESFFAPALD GLNVLMAEDD HFSGILGVKL
LGAFGASVRH VQNGRQALEA LRSEPFDLVL MDVQMPVMDG VEATVRIRHG DAGDCARNIP
IIAMTSYAMD GDREKFLKAG MNAYVSKPVD IKELMSAISE MLHRESAKRS DTAKGRH