Gene Dbac_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0154 
Symbol 
ID8375787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp180623 
End bp181147 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID644999381 
Product3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 
Protein accessionYP_003156697 
Protein GI256827969 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.789947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCTG AGCGCCTCGC CCGGGACGTG CGTCTCATGG TTCTGGACGT GGACGGGGTG 
CTGACCGACG GCGGCCTCTA TTATGACGAA TCGGGCTGCG TGCTGAAGCG CTTCAACGTC
CAGGACGGAC TGGCCATCAA GATGGCCCCC CAGGCGGGGC TGGAATTCGC GGTCATCACC
GGCCTGGACT CTCCGGCCGT ACGCCGCCGG GTAACGGAGC TTGGCATCAC CCACTACCAT
CCCGGCCATC ACCGCAAGGC CCCGGTCCTG CGCGGAATTT CCGAACAGAC CGGCATCCCC
CTCTCGAACA TGGCCTATGT CGGGGACGAC TGGGTCGACG CCGCACCCAT GTCCCTGGTC
GGACTGCCCA TCGCCGTGCC CAATGCCCGG CCCGAAATAC TCAAACTCGC CGTCTGGACC
ACCAGGGCCA TGGGCGGCCA GGGCGCAGTG CGCGAAGCCA TCGATTTCGT GCTGCGCGCC
CAGGGCAAAC TCGAAGACAT GTGGCAGGGC TGGGTCCGGG AATGA
 
Protein sequence
MNAERLARDV RLMVLDVDGV LTDGGLYYDE SGCVLKRFNV QDGLAIKMAP QAGLEFAVIT 
GLDSPAVRRR VTELGITHYH PGHHRKAPVL RGISEQTGIP LSNMAYVGDD WVDAAPMSLV
GLPIAVPNAR PEILKLAVWT TRAMGGQGAV REAIDFVLRA QGKLEDMWQG WVRE