| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0150 |
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| Symbol | |
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| ID | 8375783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 177295 |
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| End bp | 178722 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644999377 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_003156693 |
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| Protein GI | 256827965 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.125748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCTTG AACTCCGACA AAACCTCAAG CTGACGCAGC AGCTGGTCAT GACCCCACAG
CTGCAGCAGG CTATCAAGCT GCTCCAGCTC TCCCGATTCG AGCTCCTTGA AGCCGTTCAG
CAAGAGCTCT TGGAGAACCC CATGCTTGAA GAAGGGGTCA AGGAAATTTC CGAAGAGCAC
GATATCCAGG CTCCGATGGA ATCACGTCCC GAAGTTTCGC ACGAAGACGC GGAACTGATG
CGCAACGCGG ACTGGGAAAA CTACCTCGGC GATTTTTCAA GCACCGCCAA GCAGGTACAG
TTCAAGGAGA CCGAAGCCCT GGAAGAGATG ATGTCCTACG AGGCCAGGCT CTCGGGCAAG
CCATCCCTGG ATGGGCATCT CTTGTGGCAG CTCTGCCTGT CCAACATCAC CGAAGAAGAG
GAGATGATCG GCGAAGCCAT CATCGGCAAC CTCGATTCCC AAGGCTATCT GATGAGCTCG
GCCGAGGATA TCGCCTCCGA AACGCTCTCT CCCCTGGCCT TGGTCGAGTC CATGCTGCAT
CGCCTGCAGC GCTTCGACCC CGTGGGCGTG GCCGCGCGCT CGCCCAAGGA ATGCCTGCTC
ATTCAGCTGG AGATGCTCGG CCAGGACGAT CCGATTCTCG TTTCCCTGGT GGCCGACCAT
CTCGAAGACA TCGAAAAGCG CCGCTACAAA CCGCTCCTGC GCAAGTTCAA AATCCAGATG
GAAGACCTGA AAGCCTATCT GGACATCATT CAGTCCCTGG ACCCCATGCC CGGAGCCAGC
TACGGGAGCG AGAGCACCAT CTATGTCAGC CCGGATGTTT TCGTATACGA ATACGAGGGG
GATTTCGTCA TCGTCATGAA CGACGACGGC CTACCCAAGC TGCAGCTGAG CCCCTATTAC
ATGGACGACA TGCACCTTGC GGTCAAAGGC CCGGACCGGG AATACCTGCA CGACAAGATG
CGATCCGCCA TGTGGCTCAT GAAGAGCTTG CACCAAAGGC AAAGAACATT ATATAAAGTG
GTTGAAAGCA TTGTCAGATT CCAGCGGGGC TTTTTCGAGC ACGGGGTGAC CAAGCTGAAA
CCGCTGATTT TAAAAGATGT GGCCGACGAC ATTGAAATGC ACGAATCCAC GGTCAGCCGG
ATCACCACGA ACAAGTACGT GGCCACCCCG CATGGCATCA TGGAACTGAA ATTTTTCTTC
AACTCCGCGC TGGAAATGGA TGACGGCACC CAGGTCGGCT CCGAGTCGGT CAAGGCCATC
ATCAAGAAAA TGGTCAGCGA GGAGGACCCC AAGCACCCCT TCAGCGATGA AAAGATCGCG
GCGGTGCTGA AGGAAACACT GGATGTGAAC ATCGCCCGGC GCACCGTGGC CAAGTATCGC
GCGGTGCTGG GGATAGATTC TTCATCCAAG CGAAAACAAG TTTTTTGA
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| Protein sequence | MGLELRQNLK LTQQLVMTPQ LQQAIKLLQL SRFELLEAVQ QELLENPMLE EGVKEISEEH
DIQAPMESRP EVSHEDAELM RNADWENYLG DFSSTAKQVQ FKETEALEEM MSYEARLSGK
PSLDGHLLWQ LCLSNITEEE EMIGEAIIGN LDSQGYLMSS AEDIASETLS PLALVESMLH
RLQRFDPVGV AARSPKECLL IQLEMLGQDD PILVSLVADH LEDIEKRRYK PLLRKFKIQM
EDLKAYLDII QSLDPMPGAS YGSESTIYVS PDVFVYEYEG DFVIVMNDDG LPKLQLSPYY
MDDMHLAVKG PDREYLHDKM RSAMWLMKSL HQRQRTLYKV VESIVRFQRG FFEHGVTKLK
PLILKDVADD IEMHESTVSR ITTNKYVATP HGIMELKFFF NSALEMDDGT QVGSESVKAI
IKKMVSEEDP KHPFSDEKIA AVLKETLDVN IARRTVAKYR AVLGIDSSSK RKQVF
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